RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-215	ENST00000586884		Q6ZSA8	131 aa		10.11	□□□□□ -0.79
MBD1-215	ENST00000586884	STAG3L2	P0CL84	134 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	STAG3L3	P0CL85	134 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	CDC34	P49427	236 aa	Predicted RBP	10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	WFDC2	Q14508	124 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	SMUG1	Q53HV7	270 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	TOR2A	Q5JU69	321 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	TMEM75	Q8N9X5	138 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	PSG8	Q9UQ74	426 aa		10.1	□□□□□ -0.79
MBD1-215	ENST00000586884	IGLV2-11	P01706	119 aa		10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	RNASE3	P12724	160 aa	Known RBP	10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	FLI1	Q01543	452 aa	Predicted RBP	10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	IFITM3	Q01628	133 aa		10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	PIK3CD-AS1	Q5SR53	167 aa		10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	ZFP2	Q6ZN57	461 aa		10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	OR2G3	Q8NGZ4	309 aa		10.09	□□□□□ -0.79
MBD1-215	ENST00000586884	SUN5	Q8TC36	379 aa		10.09	□□□□□ -0.79
MBD1-215	ENST00000586884		A0A087WWC5	75 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884		A8MWV9	139 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	LINC00694	P0DN24	101 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	SAPCD1	Q5SSQ6	148 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	LINC00528	Q8N1L1	170 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884		Q8N3U1	123 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	CYB561D1	Q8N8Q1	229 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	PARL	Q9H300	379 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	COX11	Q9Y6N1	276 aa		10.08	□□□□□ -0.8
MBD1-215	ENST00000586884	GAGE12J	A6NER3	117 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	GCHFR	P30047	84 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	GAGE1	Q13065	139 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	GAGE4	Q13068	117 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	GAGE5	Q13069	117 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	GAGE13	Q4V321	117 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	PRNT	Q86SH4	94 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	DEFB104A	Q8WTQ1	72 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	RAB24	Q969Q5	203 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	PSMG3	Q9BT73	122 aa	Predicted RBP	10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	EPDR1	Q9UM22	224 aa		10.07	□□□□□ -0.8
MBD1-215	ENST00000586884	GGTLC3	B5MD39	225 aa		10.06	□□□□□ -0.8
MBD1-215	ENST00000586884	LECT2	O14960	151 aa		10.06	□□□□□ -0.8
MBD1-215	ENST00000586884	SUMO1	P63165	101 aa	Known RBP	10.06	□□□□□ -0.8
MBD1-215	ENST00000586884	DAZ4	Q86SG3	579 aa	Known RBP	10.06	□□□□□ -0.8
MBD1-215	ENST00000586884	DAZ3	Q9NR90	486 aa	Known RBP	10.06	□□□□□ -0.8
MBD1-215	ENST00000586884	TMEM167B	Q9NRX6	74 aa		10.06	□□□□□ -0.8
MBD1-215	ENST00000586884	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	MB	P02144	154 aa		10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	S100A4	P26447	101 aa	Known RBP	10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	FGF8	P55075	233 aa	Predicted RBP	10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	DEFA1	P59665	94 aa		10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	DEFA3	P59666	94 aa		10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	HSD17B11	Q8NBQ5	300 aa		10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	RMI2	Q96E14	147 aa		10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	LINC00479	Q96M42	142 aa		10.05	□□□□□ -0.8
MBD1-215	ENST00000586884	IGKV3D-20	A0A0C4DH25	116 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	CXorf1	O96002	111 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	SEC11B	P0C7V7	166 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	ASIP	P42127	132 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	SERF2	P84101	59 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	OR2T35	Q8NGX2	323 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	IL36B	Q9NZH7	164 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	URGCP-MRPS24	S4R325	110 aa		10.04	□□□□□ -0.8
MBD1-215	ENST00000586884	RHOD	O00212	210 aa		10.03	□□□□□ -0.8
MBD1-215	ENST00000586884	ATP6V0C	P27449	155 aa		10.03	□□□□□ -0.8
MBD1-215	ENST00000586884	UFSP1	Q6NVU6	142 aa		10.03	□□□□□ -0.8
MBD1-215	ENST00000586884		Q8N976	141 aa		10.03	□□□□□ -0.8
MBD1-215	ENST00000586884	BAALC	Q8WXS3	180 aa		10.03	□□□□□ -0.8
MBD1-215	ENST00000586884	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.03	□□□□□ -0.8
MBD1-215	ENST00000586884		A0A1W2PRE2	83 aa		10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	FABP5P3	A8MUU1	101 aa		10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	SCX	Q7RTU7	201 aa		10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	C14orf178	Q8N769	122 aa	Predicted RBP	10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	SAMD10	Q9BYL1	202 aa		10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	TNFSF18	Q9UNG2	199 aa		10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	ARL2-SNX15	V9GYD0	113 aa		10.02	□□□□□ -0.81
MBD1-215	ENST00000586884	RBFOX3	A6NFN3	312 aa		10.01	□□□□□ -0.81
MBD1-215	ENST00000586884	NIT1	Q86X76	327 aa		10.01	□□□□□ -0.81
MBD1-215	ENST00000586884	SYT8	Q8NBV8	401 aa		10.01	□□□□□ -0.81
MBD1-215	ENST00000586884	AQP10	Q96PS8	301 aa		10.01	□□□□□ -0.81
MBD1-215	ENST00000586884	JPT2	Q9H910	190 aa		10.01	□□□□□ -0.81
MBD1-215	ENST00000586884		Q9UF83	564 aa		10.01	□□□□□ -0.81
MBD1-215	ENST00000586884	IGKV2D-24	A0A075B6R9	120 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884	RNF222	A6NCQ9	220 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884		B4DEV8	164 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884	LINC01620	Q4KN68	170 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884	DNLZ	Q5SXM8	178 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884	CHCHD7	Q9BUK0	85 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884	CHAC1	Q9BUX1	264 aa		10	□□□□□ -0.81
MBD1-215	ENST00000586884	TRAV34	A0A0B4J273	112 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884		H3BVH4	76 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884	IFNA7	P01567	189 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884	ELOB	Q15370	118 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884	DMRTA1	Q5VZB9	504 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884		Q86TA4	180 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884	OR11H4	Q8NGC9	324 aa		9.99	□□□□□ -0.81
MBD1-215	ENST00000586884		A0A087WX48	190 aa		9.98	□□□□□ -0.81
MBD1-215	ENST00000586884	KRBOX1	C9JBD0	128 aa		9.98	□□□□□ -0.81
MBD1-215	ENST00000586884	PEX7	O00628	323 aa		9.98	□□□□□ -0.81
MBD1-215	ENST00000586884	FAM74A4	Q5TZK3	123 aa		9.98	□□□□□ -0.81
MBD1-215	ENST00000586884	KCNIP4	Q6PIL6	250 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms