RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
SDF2-202ENST00000585428 ZNF506Q5JVG8 444 aa9.53□□□□□ -0.88
SDF2-202ENST00000585428 SUN5Q8TC36 379 aa9.53□□□□□ -0.88
SDF2-202ENST00000585428 TCRAP04437 139 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 LINC00694P0DN24 101 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
SDF2-202ENST00000585428 ZFP2Q6ZN57 461 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
SDF2-202ENST00000585428 OR10G9Q8NGN4 311 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 OR10G7Q8NGN6 311 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 SH3BGRL3Q9H299 93 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
SDF2-202ENST00000585428 Q9UF83 564 aa9.52□□□□□ -0.89
SDF2-202ENST00000585428 RNF222A6NCQ9 220 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 INMT-MINDY4F8WBC2 141 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 LECT2O14960 151 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 HMGB3O15347 200 aaKnown RBP9.51□□□□□ -0.89
SDF2-202ENST00000585428 GCGP01275 180 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 RAB2AP61019 212 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 IFITM3Q01628 133 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 UFSP1Q6NVU6 142 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 ENKURQ8TC29 256 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 BAALCQ8WXS3 180 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 MARVELD1Q9BSK0 173 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 PSG8Q9UQ74 426 aa9.51□□□□□ -0.89
SDF2-202ENST00000585428 TMEM238LA0A1B0GVL6 79 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 PET100P0DJ07 73 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 SERTAD4-AS1Q5TG53 156 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 S100ZQ8WXG8 99 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 PARLQ9H300 379 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 COX11Q9Y6N1 276 aa9.5□□□□□ -0.89
SDF2-202ENST00000585428 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
SDF2-202ENST00000585428 A0A087WWC5 75 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 GAGE12JA6NER3 117 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 GGTLC3B5MD39 225 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 EIF4EBP3O60516 100 aaPredicted RBP9.49□□□□□ -0.89
SDF2-202ENST00000585428 UPK1BO75841 260 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 STAG3L2P0CL84 134 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 STAG3L3P0CL85 134 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 GAGE1Q13065 139 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 GAGE4Q13068 117 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 GAGE5Q13069 117 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 LINC01620Q4KN68 170 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 GAGE13Q4V321 117 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 SMUG1Q53HV7 270 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 TOR2AQ5JU69 321 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 SCXQ7RTU7 201 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 EPDR1Q9UM22 224 aa9.49□□□□□ -0.89
SDF2-202ENST00000585428 A8MWV9 139 aa9.48□□□□□ -0.89
SDF2-202ENST00000585428 K7EQM0 130 aa9.48□□□□□ -0.89
SDF2-202ENST00000585428 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
SDF2-202ENST00000585428 FLI1Q01543 452 aaPredicted RBP9.48□□□□□ -0.89
SDF2-202ENST00000585428 Q8N976 141 aa9.48□□□□□ -0.89
SDF2-202ENST00000585428 OR2T35Q8NGX2 323 aa9.48□□□□□ -0.89
SDF2-202ENST00000585428 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
SDF2-202ENST00000585428 SAMD10Q9BYL1 202 aa9.48□□□□□ -0.89
SDF2-202ENST00000585428 GCHFRP30047 84 aa9.47□□□□□ -0.89
SDF2-202ENST00000585428 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
SDF2-202ENST00000585428 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
SDF2-202ENST00000585428 PRNTQ86SH4 94 aa9.47□□□□□ -0.89
SDF2-202ENST00000585428 RAB24Q969Q5 203 aa9.47□□□□□ -0.89
SDF2-202ENST00000585428 DNAJC30Q96LL9 226 aa9.47□□□□□ -0.89
SDF2-202ENST00000585428 JPT2Q9H910 190 aa9.47□□□□□ -0.89
SDF2-202ENST00000585428 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.9
SDF2-202ENST00000585428 OXTP01178 125 aa9.46□□□□□ -0.9
SDF2-202ENST00000585428 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.9
SDF2-202ENST00000585428 NIT1Q86X76 327 aa9.46□□□□□ -0.9
SDF2-202ENST00000585428 C14orf178Q8N769 122 aaPredicted RBP9.46□□□□□ -0.9
SDF2-202ENST00000585428 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
SDF2-202ENST00000585428 CIRBP-AS1Q8TBR5 109 aa9.46□□□□□ -0.9
SDF2-202ENST00000585428 FABP5P3A8MUU1 101 aa9.45□□□□□ -0.9
SDF2-202ENST00000585428 SSNA1O43805 119 aa9.45□□□□□ -0.9
SDF2-202ENST00000585428 LGALSLQ3ZCW2 172 aaPredicted RBP9.45□□□□□ -0.9
SDF2-202ENST00000585428 ZFP69Q49AA0 526 aa9.45□□□□□ -0.9
SDF2-202ENST00000585428 IL36BQ9NZH7 164 aa9.45□□□□□ -0.9
SDF2-202ENST00000585428 HMCN2Q8NDA2 5059 aa9.44□□□□□ -0.9
SDF2-202ENST00000585428 S100A4P26447 101 aaKnown RBP9.44□□□□□ -0.9
SDF2-202ENST00000585428 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
SDF2-202ENST00000585428 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
SDF2-202ENST00000585428 RMI2Q96E14 147 aa9.44□□□□□ -0.9
SDF2-202ENST00000585428 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
SDF2-202ENST00000585428 CXorf1O96002 111 aa9.43□□□□□ -0.9
SDF2-202ENST00000585428 CRIP1P50238 77 aa9.43□□□□□ -0.9
SDF2-202ENST00000585428 SERF2P84101 59 aa9.43□□□□□ -0.9
SDF2-202ENST00000585428 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
SDF2-202ENST00000585428 TMEM167BQ9NRX6 74 aa9.43□□□□□ -0.9
SDF2-202ENST00000585428 KLK12Q9UKR0 248 aa9.43□□□□□ -0.9
SDF2-202ENST00000585428 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 TRAV34A0A0B4J273 112 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 A0A1W2PRE2 83 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 MBP02144 154 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 SEC11BP0C7V7 166 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms