RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	TRGV4	A0A0C4DH28	118 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	PGPEP1L	A6NFU8	196 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	PDE6D	O43924	150 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	BCL2	P10415	239 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	TAGLN2	P37802	199 aa	Known RBP	11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	RPL35	P42766	123 aa	Known RBP	11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	ZNF506	Q5JVG8	444 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	LYPD6B	Q8NI32	183 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908	UPK3B	Q9BT76	320 aa		11.25	□□□□□ -0.61
ERBB2-222	ENST00000584908		C9JCJ5	164 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	RS1	O15537	224 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	S100A4	P26447	101 aa	Known RBP	11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	BLOC1S1	P78537	153 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	ESRG	Q1W209	222 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	CFAP126	Q5VTH2	177 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	NHLRC2	Q8NBF2	726 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	DERL1	Q9BUN8	251 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908	ICOS	Q9Y6W8	199 aa		11.24	□□□□□ -0.61
ERBB2-222	ENST00000584908		M0R036	132 aa		11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	GATA1	P15976	413 aa	Predicted RBP	11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	SCRT2	Q9NQ03	307 aa		11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	VAX2	Q9UIW0	290 aa		11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	MRPS16	Q9Y3D3	137 aa	Known RBP	11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	BOLA1	Q9Y3E2	137 aa		11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	DNAH17	Q9UFH2	4485 aa		11.23	□□□□□ -0.61
ERBB2-222	ENST00000584908	CXCL1	P09341	107 aa		11.22	□□□□□ -0.61
ERBB2-222	ENST00000584908	MRPL23	Q16540	153 aa	Known RBP	11.22	□□□□□ -0.61
ERBB2-222	ENST00000584908	SMIM12	Q96EX1	92 aa		11.22	□□□□□ -0.61
ERBB2-222	ENST00000584908	IGLV2-18	A0A075B6J9	118 aa		11.21	□□□□□ -0.61
ERBB2-222	ENST00000584908		H3BVH4	76 aa		11.21	□□□□□ -0.61
ERBB2-222	ENST00000584908		K7EQD1	137 aa		11.21	□□□□□ -0.61
ERBB2-222	ENST00000584908	IGLV2-8	P01709	118 aa		11.21	□□□□□ -0.61
ERBB2-222	ENST00000584908	ARMS2	P0C7Q2	107 aa		11.21	□□□□□ -0.61
ERBB2-222	ENST00000584908	GRIFIN	A4D1Z8	144 aa		11.2	□□□□□ -0.62
ERBB2-222	ENST00000584908		A8MWV9	139 aa		11.2	□□□□□ -0.62
ERBB2-222	ENST00000584908		M0R2N4	97 aa		11.2	□□□□□ -0.62
ERBB2-222	ENST00000584908	MED14OS	P0DP75	135 aa		11.2	□□□□□ -0.62
ERBB2-222	ENST00000584908	ZFP2	Q6ZN57	461 aa		11.2	□□□□□ -0.62
ERBB2-222	ENST00000584908	TRBV20OR9-2	A0A075B6H5	130 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	NBDY	A0A0U1RRE5	68 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	TRBV6-4	A0A1B0GX49	114 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	GYPE	P15421	78 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	CENPW	Q5EE01	88 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	UFSP1	Q6NVU6	142 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	NEGR1	Q7Z3B1	354 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908		Q9H8V8	135 aa		11.19	□□□□□ -0.62
ERBB2-222	ENST00000584908	DMRTA1	Q5VZB9	504 aa		11.18	□□□□□ -0.62
ERBB2-222	ENST00000584908	LINC00336	Q6ZUF6	198 aa		11.18	□□□□□ -0.62
ERBB2-222	ENST00000584908	SLC25A29	Q8N8R3	303 aa		11.18	□□□□□ -0.62
ERBB2-222	ENST00000584908	PARL	Q9H300	379 aa		11.18	□□□□□ -0.62
ERBB2-222	ENST00000584908	MED9	Q9NWA0	146 aa		11.18	□□□□□ -0.62
ERBB2-222	ENST00000584908	HECTD4	Q9Y4D8	3996 aa		11.18	□□□□□ -0.62
ERBB2-222	ENST00000584908	FAT2	Q9NYQ8	4349 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	TMSB15B	A0A087X1C1	80 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	RAB19	A4D1S5	217 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	RTL8C	O15255	209 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	MGST1	P10620	155 aa	Known RBP	11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	SRI	P30626	198 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	GNG4	P50150	75 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	PRR27	Q6MZM9	219 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	LYPD5	Q6UWN5	251 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	SH2D6	Q7Z4S9	175 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	SYT8	Q8NBV8	401 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	PCNP	Q8WW12	178 aa	Known RBP	11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	PHLDA3	Q9Y5J5	127 aa		11.17	□□□□□ -0.62
ERBB2-222	ENST00000584908	C19orf71	A6NCJ1	209 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	RBFOX3	A6NFN3	312 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	TMEM250	H0YL14	139 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	SNAI2	O43623	268 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	NDUFS6	O75380	124 aa	Known RBP	11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	NXPH4	O95158	308 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	RPL19	P84098	196 aa	Known RBP	11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	RHOH	Q15669	191 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908	SFRP2	Q96HF1	295 aa		11.16	□□□□□ -0.62
ERBB2-222	ENST00000584908		A0A1W2PPQ1	181 aa		11.15	□□□□□ -0.62
ERBB2-222	ENST00000584908	OR5AL1	P0C617	328 aa		11.15	□□□□□ -0.62
ERBB2-222	ENST00000584908	TIRAP	P58753	221 aa		11.15	□□□□□ -0.62
ERBB2-222	ENST00000584908	ZFP82	Q8N141	532 aa		11.15	□□□□□ -0.62
ERBB2-222	ENST00000584908	JPT2	Q9H910	190 aa		11.15	□□□□□ -0.62
ERBB2-222	ENST00000584908	BIRC6	Q9NR09	4857 aa		11.15	□□□□□ -0.62
ERBB2-222	ENST00000584908	IGHV3-73	A0A0B4J1V6	119 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	LOC100131303	A0A0U1RQF7	123 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	RHOD	O00212	210 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	TTC32	Q5I0X7	151 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	C1orf134	Q5TEV5	83 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	PRADC1	Q9BSG0	188 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	SAMD10	Q9BYL1	202 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908	BIN3	Q9NQY0	253 aa		11.14	□□□□□ -0.63
ERBB2-222	ENST00000584908		Q6ZSN1	163 aa		11.13	□□□□□ -0.63
ERBB2-222	ENST00000584908	KRTAP1-5	Q9BYS1	174 aa		11.13	□□□□□ -0.63
ERBB2-222	ENST00000584908		M0R381	172 aa		11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	SIVA1	O15304	175 aa		11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	CRYGD	P07320	174 aa		11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	BTF3	P20290	206 aa	Known RBP	11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	SOHLH1	Q5JUK2	328 aa		11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	DAZAP1	Q96EP5	407 aa	Known RBP	11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	FAM210A	Q96ND0	272 aa		11.12	□□□□□ -0.63
ERBB2-222	ENST00000584908	IGLC6	P0CF74	106 aa		11.11	□□□□□ -0.63
ERBB2-222	ENST00000584908	LINC00694	P0DN24	101 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 1514.7 ms