RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	GCHFR	P30047	84 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	GAGE1	Q13065	139 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	GAGE4	Q13068	117 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	GAGE5	Q13069	117 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	GAGE13	Q4V321	117 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	SMUG1	Q53HV7	270 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	SRRM2	Q9UQ35	2752 aa	Known RBP	10.06	□□□□□ -0.8
SREBF1-222	ENST00000583732	CIDEA	O60543	219 aa		10.06	□□□□□ -0.8
SREBF1-222	ENST00000583732	MGST1	P10620	155 aa	Known RBP	10.06	□□□□□ -0.8
SREBF1-222	ENST00000583732	RNASE3	P12724	160 aa	Known RBP	10.06	□□□□□ -0.8
SREBF1-222	ENST00000583732	FLI1	Q01543	452 aa	Predicted RBP	10.06	□□□□□ -0.8
SREBF1-222	ENST00000583732	RAB24	Q969Q5	203 aa		10.06	□□□□□ -0.8
SREBF1-222	ENST00000583732	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	GGTLC3	B5MD39	225 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732		J3QL48	77 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	IGLV2-11	P01706	119 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	SUMO1	P63165	101 aa	Known RBP	10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	LAGE3	Q14657	143 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	TM2D2	Q9BX73	214 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	PARL	Q9H300	379 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	BOLA1	Q9Y3E2	137 aa		10.05	□□□□□ -0.8
SREBF1-222	ENST00000583732	S100A4	P26447	101 aa	Known RBP	10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	ATP6V0C	P27449	155 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	DEFA1	P59665	94 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	DEFA3	P59666	94 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	DAZ4	Q86SG3	579 aa	Known RBP	10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	CYB561D1	Q8N8Q1	229 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	OR2T35	Q8NGX2	323 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	OR2G3	Q8NGZ4	309 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	DAZ3	Q9NR90	486 aa	Known RBP	10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	EPDR1	Q9UM22	224 aa		10.04	□□□□□ -0.8
SREBF1-222	ENST00000583732	TRAV34	A0A0B4J273	112 aa		10.03	□□□□□ -0.8
SREBF1-222	ENST00000583732	LINC00479	Q96M42	142 aa		10.03	□□□□□ -0.8
SREBF1-222	ENST00000583732	JPT2	Q9H910	190 aa		10.03	□□□□□ -0.8
SREBF1-222	ENST00000583732	IGKV3D-20	A0A0C4DH25	116 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	LINC01620	Q4KN68	170 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	LINC00528	Q8N1L1	170 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	C14orf178	Q8N769	122 aa	Predicted RBP	10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	SUN5	Q8TC36	379 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	PTH2	Q96A98	100 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	PSMG3	Q9BT73	122 aa	Predicted RBP	10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	SAMD10	Q9BYL1	202 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	SH3BGRL3	Q9H299	93 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	TMEM167B	Q9NRX6	74 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732		Q9UF83	564 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732	ALG5	Q9Y673	324 aa		10.02	□□□□□ -0.81
SREBF1-222	ENST00000583732		A8MWV9	139 aa		10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	CXorf1	O96002	111 aa		10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	LINC00694	P0DN24	101 aa		10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	ASIP	P42127	132 aa		10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	BAALC	Q8WXS3	180 aa		10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	ARL2-SNX15	V9GYD0	113 aa		10.01	□□□□□ -0.81
SREBF1-222	ENST00000583732	TRAV8-3	A0A0A6YYJ7	113 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732		H3BVH4	76 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732	MB	P02144	154 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732	C1QB	P02746	253 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732	PLA2G1B	P04054	148 aa	Known RBP	10	□□□□□ -0.81
SREBF1-222	ENST00000583732	UBE2G2	P60604	165 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732	SAPCD1	Q5SSQ6	148 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732	ZFP2	Q6ZN57	461 aa		10	□□□□□ -0.81
SREBF1-222	ENST00000583732	IFNA7	P01567	189 aa		9.99	□□□□□ -0.81
SREBF1-222	ENST00000583732	TOR2A	Q5JU69	321 aa		9.99	□□□□□ -0.81
SREBF1-222	ENST00000583732	FAM74A4	Q5TZK3	123 aa		9.99	□□□□□ -0.81
SREBF1-222	ENST00000583732		Q6ZSA8	131 aa		9.99	□□□□□ -0.81
SREBF1-222	ENST00000583732	DNAJC30	Q96LL9	226 aa		9.99	□□□□□ -0.81
SREBF1-222	ENST00000583732		B4DEV8	164 aa		9.98	□□□□□ -0.81
SREBF1-222	ENST00000583732		M0R036	132 aa		9.98	□□□□□ -0.81
SREBF1-222	ENST00000583732		Q86TA4	180 aa		9.98	□□□□□ -0.81
SREBF1-222	ENST00000583732	AQP10	Q96PS8	301 aa		9.98	□□□□□ -0.81
SREBF1-222	ENST00000583732	URGCP-MRPS24	S4R325	110 aa		9.98	□□□□□ -0.81
SREBF1-222	ENST00000583732	IGKV2D-24	A0A075B6R9	120 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732		A0A1W2PRE2	83 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	GRIFIN	A4D1Z8	144 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	RBFOX3	A6NFN3	312 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	FABP5P3	A8MUU1	101 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	PEX7	O00628	323 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	SERF2	P84101	59 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	DMRTA1	Q5VZB9	504 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732	UFSP1	Q6NVU6	142 aa		9.97	□□□□□ -0.81
SREBF1-222	ENST00000583732		A0A087WWC5	75 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732		A0A087WWL8	130 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732		A6NHS1	94 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	ARMS2	P0C7Q2	107 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	FGF8	P55075	233 aa	Predicted RBP	9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	ZNF726P1	Q15940	193 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	SCX	Q7RTU7	201 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	SYT8	Q8NBV8	401 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	OR11H4	Q8NGC9	324 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	RMI2	Q96E14	147 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	IL36B	Q9NZH7	164 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	KLK12	Q9UKR0	248 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	TNFSF18	Q9UNG2	199 aa		9.96	□□□□□ -0.82
SREBF1-222	ENST00000583732	TMSB15B	A0A087X1C1	80 aa		9.95	□□□□□ -0.82
SREBF1-222	ENST00000583732	RHOD	O00212	210 aa		9.95	□□□□□ -0.82
SREBF1-222	ENST00000583732	SH2D1A	O60880	128 aa		9.95	□□□□□ -0.82
SREBF1-222	ENST00000583732		Q5BKY6	102 aa		9.95	□□□□□ -0.82
SREBF1-222	ENST00000583732	PIK3CD-AS1	Q5SR53	167 aa		9.95	□□□□□ -0.82
SREBF1-222	ENST00000583732	RPL7L1	Q6DKI1	246 aa	Known RBP	9.95	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms