RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 SMUG1Q53HV7 270 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 C10orf113Q5VZT2 155 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 ZNF493Q6ZR52 646 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 LINC01551Q86U37 167 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 ZFP82Q8N141 532 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 TMEM70Q9BUB7 260 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 PLA2G2DQ9UNK4 145 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 PRELID1Q9Y255 219 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 TRBV24-1A0A075B6N3 115 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 GGTLC3B5MD39 225 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 C9JCJ5 164 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 H7BYZ3 331 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 COX7A2P2O60397 106 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 OR7C2O60412 319 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
CCDC47-205ENST00000582331 FABP1P07148 127 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 GALR1P47211 349 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 LYZP61626 148 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 OCC1Q8TAD7 63 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 DEFB104AQ8WTQ1 72 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 FXYD5Q96DB9 178 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 ANAPC16Q96DE5 110 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 PFDN5Q99471 154 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 PAXXQ9BUH6 204 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 SLC25A39Q9BZJ4 359 aaPredicted RBP5.19□□□□□ -1.58
CCDC47-205ENST00000582331 BIN3Q9NQY0 253 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 LY96Q9Y6Y9 160 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 URGCP-MRPS24S4R325 110 aa5.19□□□□□ -1.58
CCDC47-205ENST00000582331 TRAV9-2A0A087WT02 112 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 A0A096LPF7 62 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 GAGE12BA1L429 117 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 PGPEP1LA6NFU8 196 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 C5orf52A6NGY3 159 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 PHOX2AO14813 284 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 HYPMO75409 117 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 GAGE7O76087 117 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 OR10J4P0C629 311 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 GAGE12FP0CL80 117 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 GAGE12GP0CL81 117 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 GAGE12IP0CL82 117 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 PYYP10082 97 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 RPS10P46783 165 aaKnown RBP5.18□□□□□ -1.58
CCDC47-205ENST00000582331 SUMO1P63165 101 aaKnown RBP5.18□□□□□ -1.58
CCDC47-205ENST00000582331 UBE2L3P68036 154 aaKnown RBP5.18□□□□□ -1.58
CCDC47-205ENST00000582331 LINC00612Q8N6U2 182 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 RNASE8Q8TDE3 154 aaKnown RBP5.18□□□□□ -1.58
CCDC47-205ENST00000582331 TMEM263Q8WUH6 116 aaKnown RBP5.18□□□□□ -1.58
CCDC47-205ENST00000582331 OR51M1Q9H341 326 aa5.18□□□□□ -1.58
CCDC47-205ENST00000582331 IGLV5-52A0A0A0MRZ9 124 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 ZNF98A6NK75 572 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 K7EN84 100 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 NXPH4O95158 308 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 IGLV2-8P01709 118 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 ORM2P19652 201 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 RPL35P42766 123 aaKnown RBP5.17□□□□□ -1.58
CCDC47-205ENST00000582331 IGFL4Q6B9Z1 124 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 LINC00305Q7Z4B0 112 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 ZNF738Q8NE65 137 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 OR1B1Q8NGR6 318 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 VSIG2Q96IQ7 327 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
CCDC47-205ENST00000582331 TRAV8-2A0A0B4J237 113 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 SNURFLB1AK76 121 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 PPP1R2P9O14990 202 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 TYMSP04818 313 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 NBEAP1P0C6P0 100 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 SNRPEP62304 92 aaKnown RBP5.16□□□□□ -1.58
CCDC47-205ENST00000582331 HIST1H1AQ02539 215 aaPredicted RBP5.16□□□□□ -1.58
CCDC47-205ENST00000582331 RNF182Q8N6D2 247 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 OR8A1Q8NGG7 326 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 OR10G8Q8NGN5 311 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 SFRP2Q96HF1 295 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 IMMP2LQ96T52 175 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 SHANK2-AS3Q9BTD1 123 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 TMEM14CQ9P0S9 112 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 HIGD1AQ9Y241 93 aa5.16□□□□□ -1.58
CCDC47-205ENST00000582331 H3BRN7 92 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 MRPS12O15235 138 aaKnown RBP5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BKO60814 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 GCGP01275 180 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 TRGC2P03986 189 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BJP06899 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BOP23527 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 S100PP25815 95 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BBP33778 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 CDKN1BP46527 198 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 GNG4P50150 75 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BDP58876 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BCP62807 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST2H2BEQ16778 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 CENPWQ5EE01 88 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BHQ93079 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 GPR82Q96P67 336 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BNQ99877 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H2BMQ99879 126 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 C20orf144Q9BQM9 153 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 TCEAL7Q9BRU2 100 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms