RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
SNORD55-201ENST00000581525 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
SNORD55-201ENST00000581525 B4DEV8 164 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 PAX4O43316 350 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 ORM1P02763 201 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 BCL2P10415 239 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 GATA1P15976 413 aaPredicted RBP8.73□□□□□ -1.01
SNORD55-201ENST00000581525 RPL35P42766 123 aaKnown RBP8.73□□□□□ -1.01
SNORD55-201ENST00000581525 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 ALKAL2Q6UX46 152 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 VAX2Q9UIW0 290 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
SNORD55-201ENST00000581525 BIRC6Q9NR09 4857 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 HECTD4Q9Y4D8 3996 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 IFNA1P01562 189 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 MED14OSP0DP75 135 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 ASIPP42127 132 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
SNORD55-201ENST00000581525 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
SNORD55-201ENST00000581525 ZNF506Q5JVG8 444 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 UFSP1Q6NVU6 142 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 ZFP2Q6ZN57 461 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
SNORD55-201ENST00000581525 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
SNORD55-201ENST00000581525 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
SNORD55-201ENST00000581525 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.02
SNORD55-201ENST00000581525 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.02
SNORD55-201ENST00000581525 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.02
SNORD55-201ENST00000581525 DERL1Q9BUN8 251 aa8.71□□□□□ -1.02
SNORD55-201ENST00000581525 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
SNORD55-201ENST00000581525 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
SNORD55-201ENST00000581525 A8MWV9 139 aa8.7□□□□□ -1.02
SNORD55-201ENST00000581525 K7EQD1 137 aa8.7□□□□□ -1.02
SNORD55-201ENST00000581525 S100A4P26447 101 aaKnown RBP8.7□□□□□ -1.02
SNORD55-201ENST00000581525 Q9H8V8 135 aa8.7□□□□□ -1.02
SNORD55-201ENST00000581525 PKD1P98161 4303 aa8.7□□□□□ -1.02
SNORD55-201ENST00000581525 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 C9JCJ5 164 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 SNAI2O43623 268 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 TIRAPP58753 221 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 NHLRC2Q8NBF2 726 aa8.69□□□□□ -1.02
SNORD55-201ENST00000581525 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 RAB19A4D1S5 217 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 GRIFINA4D1Z8 144 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 RBFOX3A6NFN3 312 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 M0R036 132 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 RTL8CO15255 209 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 NXPH4O95158 308 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
SNORD55-201ENST00000581525 LINC00336Q6ZUF6 198 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 SH2D6Q7Z4S9 175 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 SFRP2Q96HF1 295 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 PARLQ9H300 379 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 MED9Q9NWA0 146 aa8.68□□□□□ -1.02
SNORD55-201ENST00000581525 A0A1W2PPQ1 181 aa8.67□□□□□ -1.02
SNORD55-201ENST00000581525 H3BVH4 76 aa8.67□□□□□ -1.02
SNORD55-201ENST00000581525 OR5AL1P0C617 328 aa8.67□□□□□ -1.02
SNORD55-201ENST00000581525 MGST1P10620 155 aaKnown RBP8.67□□□□□ -1.02
SNORD55-201ENST00000581525 GYPEP15421 78 aa8.67□□□□□ -1.02
SNORD55-201ENST00000581525 CENPWQ5EE01 88 aa8.67□□□□□ -1.02
SNORD55-201ENST00000581525 IGLV2-18A0A075B6J9 118 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 M0R2N4 97 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 CRYGDP07320 174 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 GNG4P50150 75 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 Q6ZSN1 163 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 JPT2Q9H910 190 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 BIN3Q9NQY0 253 aa8.66□□□□□ -1.02
SNORD55-201ENST00000581525 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 LINC00694P0DN24 101 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 SRIP30626 198 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
SNORD55-201ENST00000581525 RHOHQ15669 191 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 TEX261Q6UWH6 196 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
SNORD55-201ENST00000581525 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.03
SNORD55-201ENST00000581525 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 LOC100131303A0A0U1RQF7 123 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 RHODO00212 210 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 ZFP82Q8N141 532 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
SNORD55-201ENST00000581525 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 K7EP13 123 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 SIVA1O15304 175 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 RPS20P60866 119 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms