RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 ARL14EPLP0DKL9 152 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 IGHV3-30-3P0DP02 117 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 IGHV3-30-5P0DP03 117 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 RNASE3P12724 160 aaKnown RBP7.04□□□□□ -1.28
RFFL-209ENST00000581265 ZNF506Q5JVG8 444 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 SH3BGRL3Q9H299 93 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 PSG8Q9UQ74 426 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 SUMO1P63165 101 aaKnown RBP7.03□□□□□ -1.28
RFFL-209ENST00000581265 PIK3CD-AS1Q5SR53 167 aa7.03□□□□□ -1.28
RFFL-209ENST00000581265 ZFP2Q6ZN57 461 aa7.03□□□□□ -1.28
RFFL-209ENST00000581265 Q6ZSA8 131 aa7.03□□□□□ -1.28
RFFL-209ENST00000581265 OR2G3Q8NGZ4 309 aa7.03□□□□□ -1.28
RFFL-209ENST00000581265 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
RFFL-209ENST00000581265 EPDR1Q9UM22 224 aa7.03□□□□□ -1.28
RFFL-209ENST00000581265 TRAV8-3A0A0A6YYJ7 113 aa7.02□□□□□ -1.29
RFFL-209ENST00000581265 PLA2G1BP04054 148 aaKnown RBP7.02□□□□□ -1.29
RFFL-209ENST00000581265 GCHFRP30047 84 aa7.02□□□□□ -1.29
RFFL-209ENST00000581265 CDC34P49427 236 aaPredicted RBP7.02□□□□□ -1.29
RFFL-209ENST00000581265 FLI1Q01543 452 aaPredicted RBP7.02□□□□□ -1.29
RFFL-209ENST00000581265 WFDC2Q14508 124 aa7.02□□□□□ -1.29
RFFL-209ENST00000581265 SMUG1Q53HV7 270 aa7.02□□□□□ -1.29
RFFL-209ENST00000581265 SAPCD1Q5SSQ6 148 aa7.02□□□□□ -1.29
RFFL-209ENST00000581265 TMEM75Q8N9X5 138 aa7.02□□□□□ -1.29
RFFL-209ENST00000581265 IGKV3D-20A0A0C4DH25 116 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 A8MWV9 139 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 LINC00694P0DN24 101 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 SERF2P84101 59 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 ZFP69Q49AA0 526 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 PRNTQ86SH4 94 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 Q8N3U1 123 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 CYB561D1Q8N8Q1 229 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 DEFB104AQ8WTQ1 72 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 PSMG3Q9BT73 122 aaPredicted RBP7.01□□□□□ -1.29
RFFL-209ENST00000581265 PARLQ9H300 379 aa7.01□□□□□ -1.29
RFFL-209ENST00000581265 A0A087WWC5 75 aa7□□□□□ -1.29
RFFL-209ENST00000581265 GGTLC3B5MD39 225 aa7□□□□□ -1.29
RFFL-209ENST00000581265 CXorf1O96002 111 aa7□□□□□ -1.29
RFFL-209ENST00000581265 MBP02144 154 aa7□□□□□ -1.29
RFFL-209ENST00000581265 DEFA1P59665 94 aa7□□□□□ -1.29
RFFL-209ENST00000581265 DEFA3P59666 94 aa7□□□□□ -1.29
RFFL-209ENST00000581265 TOR2AQ5JU69 321 aa7□□□□□ -1.29
RFFL-209ENST00000581265 DAZ4Q86SG3 579 aaKnown RBP7□□□□□ -1.29
RFFL-209ENST00000581265 HSD17B11Q8NBQ5 300 aa7□□□□□ -1.29
RFFL-209ENST00000581265 LINC00479Q96M42 142 aa7□□□□□ -1.29
RFFL-209ENST00000581265 DAZ3Q9NR90 486 aaKnown RBP7□□□□□ -1.29
RFFL-209ENST00000581265 TMEM167BQ9NRX6 74 aa7□□□□□ -1.29
RFFL-209ENST00000581265 Q9UF83 564 aa7□□□□□ -1.29
RFFL-209ENST00000581265 COX11Q9Y6N1 276 aa7□□□□□ -1.29
RFFL-209ENST00000581265 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
RFFL-209ENST00000581265 A0A1W2PRE2 83 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 GAGE12JA6NER3 117 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 FABP5P3A8MUU1 101 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 ATP6V0CP27449 155 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 FGF8P55075 233 aaPredicted RBP6.99□□□□□ -1.29
RFFL-209ENST00000581265 GAGE1Q13065 139 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 GAGE4Q13068 117 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 GAGE5Q13069 117 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 UFSP1Q6NVU6 142 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 OR2T35Q8NGX2 323 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 ACTR3CQ9C0K3 210 aaPredicted RBP6.99□□□□□ -1.29
RFFL-209ENST00000581265 IL36BQ9NZH7 164 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 TNFSF18Q9UNG2 199 aa6.99□□□□□ -1.29
RFFL-209ENST00000581265 A6NHS1 94 aa6.98□□□□□ -1.29
RFFL-209ENST00000581265 S100A4P26447 101 aaKnown RBP6.98□□□□□ -1.29
RFFL-209ENST00000581265 LGALSLQ3ZCW2 172 aaPredicted RBP6.98□□□□□ -1.29
RFFL-209ENST00000581265 DMRTA1Q5VZB9 504 aa6.98□□□□□ -1.29
RFFL-209ENST00000581265 AQP10Q96PS8 301 aa6.98□□□□□ -1.29
RFFL-209ENST00000581265 JPT2Q9H910 190 aa6.98□□□□□ -1.29
RFFL-209ENST00000581265 TRAV34A0A0B4J273 112 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 RNF222A6NCQ9 220 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 LECT2O14960 151 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 ASIPP42127 132 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 DNLZQ5SXM8 178 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 C14orf178Q8N769 122 aaPredicted RBP6.97□□□□□ -1.29
RFFL-209ENST00000581265 Q8N976 141 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 BAALCQ8WXS3 180 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 SAMD10Q9BYL1 202 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 ARL2-SNX15V9GYD0 113 aa6.97□□□□□ -1.29
RFFL-209ENST00000581265 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
RFFL-209ENST00000581265 RHODO00212 210 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 IFNA7P01567 189 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 SEC11BP0C7V7 166 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 CRIP1P50238 77 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 NIT1Q86X76 327 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 RMI2Q96E14 147 aa6.96□□□□□ -1.3
RFFL-209ENST00000581265 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 B4DEV8 164 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 KRBOX1C9JBD0 128 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 ARMS2P0C7Q2 107 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 LINC01620Q4KN68 170 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 HIST1H2BAQ96A08 127 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 CHAC1Q9BUX1 264 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 NKX6-2Q9C056 277 aaPredicted RBP6.95□□□□□ -1.3
RFFL-209ENST00000581265 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 ALG5Q9Y673 324 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms