RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 AMMECR1LQ6DCA0 310 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 LYZL1Q6UWQ5 148 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 TMEM14EPQ6UXP3 125 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 PHF5AQ7RTV0 110 aaKnown RBP1.91□□□□□ -2.1
KPNB1-208ENST00000580019 CTAGE3PQ8IX95 158 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 OR5A2Q8NGI9 324 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 BRK1Q8WUW1 75 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 ZNF714Q96N38 554 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 SMR3AQ99954 134 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 SCRT1Q9BWW7 348 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 DUSP21Q9H596 190 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 MRPL16Q9NX20 251 aaKnown RBP1.91□□□□□ -2.1
KPNB1-208ENST00000580019 GNG8Q9UK08 70 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 FAM215AQ9Y5M1 114 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 RYR3Q15413 4870 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 MEGF8Q7Z7M0 2845 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 CROCCQ5TZA2 2017 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 MYH6P13533 1939 aa1.91□□□□□ -2.1
KPNB1-208ENST00000580019 PRKDCP78527 4128 aaKnown RBP1.91□□□□□ -2.1
KPNB1-208ENST00000580019 ZNF407Q9C0G0 2248 aa1.9□□□□□ -2.1
KPNB1-208ENST00000580019 PLXNB1O43157 2135 aa1.9□□□□□ -2.1
KPNB1-208ENST00000580019 TRAV7A0A075B6U4 112 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 MDFIC2A0A1B0GVS7 189 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 H3BMG7 143 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 SDCBPO00560 298 aaPredicted RBP1.9□□□□□ -2.11
KPNB1-208ENST00000580019 PSCAO43653 123 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 GNG7O60262 68 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 PGLYRP1O75594 196 aaPredicted RBP1.9□□□□□ -2.11
KPNB1-208ENST00000580019 MT-ND4LP03901 98 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 GPX1P07203 203 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 ZNF728P0DKX0 622 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 COX6A1P12074 109 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 COX6B1P14854 86 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 FUSP35637 526 aaKnown RBP eCLIP1.9□□□□□ -2.11
KPNB1-208ENST00000580019 RAB5CP51148 216 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 COPZ1P61923 177 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 SUPT4H1P63272 117 aaKnown RBP1.9□□□□□ -2.11
KPNB1-208ENST00000580019 TAF9Q16594 264 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 HSD17B12Q53GQ0 312 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 TEX29Q8N6K0 151 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 Q8NAQ8 132 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 OR4B1Q8NGF8 309 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 OR5H6Q8NGV6 325 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 NAT14Q8WUY8 206 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 LINC00467Q9BRT7 94 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 PDCD10Q9BUL8 212 aa1.9□□□□□ -2.11
KPNB1-208ENST00000580019 NHP2Q9NX24 153 aaKnown RBP1.9□□□□□ -2.11
KPNB1-208ENST00000580019 MYO18AQ92614 2054 aaKnown RBP1.9□□□□□ -2.11
KPNB1-208ENST00000580019 POLEQ07864 2286 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 ANAPC1Q9H1A4 1944 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 TRBV27A0A0K0K1C4 114 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 K7ERJ3 54 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 GNRH2O43555 120 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 SYNGR2O43760 224 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 IGF2P01344 180 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 SMIM6P0DI80 62 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 ZNF25P17030 456 aaPredicted RBP1.89□□□□□ -2.11
KPNB1-208ENST00000580019 FXYD2P54710 66 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 LSM3P62310 102 aaKnown RBP1.89□□□□□ -2.11
KPNB1-208ENST00000580019 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 RNASE10Q5GAN6 216 aaKnown RBP1.89□□□□□ -2.11
KPNB1-208ENST00000580019 TMEM244Q5VVB8 128 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 HAGHLQ6PII5 290 aaPredicted RBP1.89□□□□□ -2.11
KPNB1-208ENST00000580019 C7orf65Q6ZTY9 151 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 SLC35E3Q7Z769 313 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 PDZD9Q8IXQ8 264 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 Q8N9L7 120 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 C1orf64Q8NEQ6 169 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 OR4E2Q8NGC2 313 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 OR8B2Q96RD0 313 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 HIGD2AQ9BW72 106 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 BANF2Q9H503 90 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 TAF9BQ9HBM6 251 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 MARCOQ9UEW3 520 aaPredicted RBP1.89□□□□□ -2.11
KPNB1-208ENST00000580019 CCL26Q9Y258 94 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 MGAM2Q2M2H8 2515 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 RP1P56715 2156 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 SONP18583 2426 aaKnown RBP1.89□□□□□ -2.11
KPNB1-208ENST00000580019 HIVEP2P31629 2446 aa1.89□□□□□ -2.11
KPNB1-208ENST00000580019 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 HEATR5AQ86XA9 2040 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 CMYA5Q8N3K9 4069 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 IGLV4-60A0A075B6I1 120 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 TRBV10-2A0A0K0K1G8 114 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 OR2T8A6NH00 312 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 C11orf86A6NJI1 115 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 H7C2G1 150 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 K7EM74 188 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 RER1O15258 196 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 MT-ND6P03923 174 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 APODP05090 189 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 METTL15P1P0C7V9 234 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 IGLC6P0CF74 106 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 ZNF14P17017 642 aaPredicted RBP1.88□□□□□ -2.11
KPNB1-208ENST00000580019 ZNF22P17026 224 aaPredicted RBP1.88□□□□□ -2.11
KPNB1-208ENST00000580019 CRYGSP22914 178 aa1.88□□□□□ -2.11
KPNB1-208ENST00000580019 GUCA1AP43080 201 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms