RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PGPEP1LA6NFU8 196 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 PRSS29PA6NIE9 313 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 A8MWV9 139 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 KRBOX1C9JBD0 128 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 H3BVH4 76 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 M0R381 172 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 SIVA1O15304 175 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 PDE6DO43924 150 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 CIDEAO60543 219 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 MGST1P10620 155 aaKnown RBP4.54□□□□□ -1.68
TRAF4-213ENST00000578917 RPL35P42766 123 aaKnown RBP4.54□□□□□ -1.68
TRAF4-213ENST00000578917 GNG4P50150 75 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 CRIP1P50238 77 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 SSTP61278 116 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 BLOC1S1P78537 153 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 TTC32Q5I0X7 151 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 ZNF506Q5JVG8 444 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 CFAP126Q5VTH2 177 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 LYPD5Q6UWN5 251 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 ALKAL2Q6UX46 152 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 SH2D6Q7Z4S9 175 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 C9orf62Q8N4C0 152 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 MRPS16Q9Y3D3 137 aaKnown RBP4.54□□□□□ -1.68
TRAF4-213ENST00000578917 K7EQD1 137 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 RS1O15537 224 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 NXPH4O95158 308 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 RNASE3P12724 160 aaKnown RBP4.53□□□□□ -1.68
TRAF4-213ENST00000578917 TAGLN2P37802 199 aaKnown RBP4.53□□□□□ -1.68
TRAF4-213ENST00000578917 MEF2BQ02080 365 aaPredicted RBP4.53□□□□□ -1.68
TRAF4-213ENST00000578917 ZNF674Q2M3X9 581 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 FAM74A4Q5TZK3 123 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 Q6ZR54 194 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 COX8CQ7Z4L0 72 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 C6orf223Q8N319 242 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 SLC25A29Q8N8R3 303 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 PTH2Q96A98 100 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 C9orf85Q96MD7 179 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 LYSTQ99698 3801 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 TPPP3Q9BW30 176 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 IL36BQ9NZH7 164 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 VAX2Q9UIW0 290 aa4.53□□□□□ -1.68
TRAF4-213ENST00000578917 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 A0A087WWL8 130 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 TRAV8-6A0A0B4J262 113 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 LOC100131303A0A0U1RQF7 123 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 A0A1B0GVG6 124 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 TRBV6-4A0A1B0GX49 114 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 RAB19A4D1S5 217 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 RTL8CO15255 209 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 BCL2P10415 239 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 GATA1P15976 413 aaPredicted RBP4.52□□□□□ -1.69
TRAF4-213ENST00000578917 EVI2AP22794 236 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 NKX2-5P52952 324 aaPredicted RBP4.52□□□□□ -1.69
TRAF4-213ENST00000578917 CEBPGP53567 150 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 RHOHQ15669 191 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 LINC01559Q495D7 138 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 CENPWQ5EE01 88 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 SPANXN1Q5VSR9 72 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 DMRTA1Q5VZB9 504 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 ZFP2Q6ZN57 461 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 ZFP82Q8N141 532 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 UPK3BQ9BT76 320 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 DERL1Q9BUN8 251 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 BIN3Q9NQY0 253 aa4.52□□□□□ -1.69
TRAF4-213ENST00000578917 MUC21A0A0G2JKD1 596 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 MUC21A0A140T8X8 626 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 A0A1W2PPQ1 181 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 XKRY2A2RUG3 117 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 RBFOX3A6NFN3 312 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 F5H697 171 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 RHODO00212 210 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 SMIM17P0DL12 118 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 RPL19P84098 196 aaKnown RBP4.51□□□□□ -1.69
TRAF4-213ENST00000578917 GAGE1Q13065 139 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 GAGE4Q13068 117 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 GAGE5Q13069 117 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 GAGE13Q4V321 117 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 OR10J3Q5JRS4 329 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 PIK3CD-AS1Q5SR53 167 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 OR2D3Q8NGH3 330 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 MLST8Q9BVC4 326 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 EIF5A2Q9GZV4 153 aaKnown RBP4.51□□□□□ -1.69
TRAF4-213ENST00000578917 PARLQ9H300 379 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 JPT2Q9H910 190 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 LY96Q9Y6Y9 160 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 MUC4Q99102 2169 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
TRAF4-213ENST00000578917 P01737 135 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 RPS20P60866 119 aaKnown RBP4.5□□□□□ -1.69
TRAF4-213ENST00000578917 DNLZQ5SXM8 178 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 Q6ZSN1 163 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.5□□□□□ -1.69
TRAF4-213ENST00000578917 C11orf52Q96A22 123 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 SAMD10Q9BYL1 202 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
TRAF4-213ENST00000578917 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
TRAF4-213ENST00000578917 IGHV3-38A0A0C4DH36 116 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms