RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 C12orf74Q32Q52 190 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 LINC01356Q8N9X3 169 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 NPBQ8NG41 125 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 XCL2Q9UBD3 114 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 IGHV7-4-1A0A0J9YVY3 117 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 I3L3M4 83 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 RHODO00212 210 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 BUB3O43684 328 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 CRPP02741 224 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 SCRT2Q9NQ03 307 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 LAMA3Q16787 3333 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 RNASE8Q8TDE3 154 aaKnown RBP8.5□□□□□ -1.05
RNF43-203ENST00000577716 RBAKDNA6NC62 111 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 C2orf70A6NJV1 201 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 J3QQQ9 107 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 RPL35AP18077 110 aaKnown RBP8.49□□□□□ -1.05
RNF43-203ENST00000577716 LINC00322Q6ZN03 302 aaPredicted RBP8.49□□□□□ -1.05
RNF43-203ENST00000577716 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 ZNF493Q6ZR52 646 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 C11orf68Q9H3H3 251 aaKnown RBP8.49□□□□□ -1.05
RNF43-203ENST00000577716 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 GATA3P23771 443 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 NSUN5P1Q3KNT7 163 aa8.49□□□□□ -1.05
RNF43-203ENST00000577716 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
RNF43-203ENST00000577716 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 FGF6P10767 208 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 Q8N9W7 124 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 EML5Q05BV3 1969 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 IGF2-ASQ6U949 168 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
RNF43-203ENST00000577716 SETD2Q9BYW2 2564 aaPredicted RBP8.48□□□□□ -1.05
RNF43-203ENST00000577716 TAX1BP3O14907 124 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 TCF15Q12870 199 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 GDF5OSQ5U4N7 250 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 LRP4O75096 1905 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 WI2-2373I1.2A0A1W2PRP0 233 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
RNF43-203ENST00000577716 DAZAP2Q15038 168 aaPredicted RBP8.47□□□□□ -1.05
RNF43-203ENST00000577716 C6orf226Q5I0X4 101 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
RNF43-203ENST00000577716 ARHGAP32A7KAX9 2087 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
RNF43-203ENST00000577716 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 LINC00574Q9H8X3 128 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 GAGE12HA6NDE8 117 aa8.47□□□□□ -1.05
RNF43-203ENST00000577716 BPTFQ12830 3046 aa8.46□□□□□ -1.05
RNF43-203ENST00000577716 C22orf34Q6ZV56 151 aa8.46□□□□□ -1.05
RNF43-203ENST00000577716 Q8N7P7 452 aa8.46□□□□□ -1.05
RNF43-203ENST00000577716 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.06
RNF43-203ENST00000577716 TP53TG3Q9ULZ0 132 aa8.46□□□□□ -1.06
RNF43-203ENST00000577716 HIVEP2P31629 2446 aa8.46□□□□□ -1.06
RNF43-203ENST00000577716 FXYD2P54710 66 aa8.46□□□□□ -1.06
RNF43-203ENST00000577716 MLST8Q9BVC4 326 aa8.46□□□□□ -1.06
RNF43-203ENST00000577716 USP9YO00507 2555 aaPredicted RBP8.46□□□□□ -1.06
RNF43-203ENST00000577716 TEX48A0A1B0GUV7 120 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 LEPROTO15243 131 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 GAGE4Q13068 117 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 GAGE5Q13069 117 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 MBD6Q96DN6 1003 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 K7EMI3 77 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 SLC25A20O43772 301 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 CTRLP40313 264 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
RNF43-203ENST00000577716 BOD1L2Q8IYS8 172 aa8.45□□□□□ -1.06
RNF43-203ENST00000577716 DEFB130BP0DP73 79 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 DEFB130AP0DP74 79 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 NBL1P41271 181 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 BLCAPP62952 87 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 LOXL1Q08397 574 aaPredicted RBP8.44□□□□□ -1.06
RNF43-203ENST00000577716 S100A7L2Q5SY68 101 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 IGLL5B9A064 214 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 H3BUA1 57 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 JPT2Q9H910 190 aa8.44□□□□□ -1.06
RNF43-203ENST00000577716 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 H3BMM0 161 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 AZU1P20160 251 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 VWC2LB2RUY7 222 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 LINC01619G3V211 115 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 DSCAMO60469 2012 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 IGHV4-61A0A0C4DH41 118 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 ANKRD11Q6UB99 2663 aaPredicted RBP8.43□□□□□ -1.06
RNF43-203ENST00000577716 IGHV4-59P01825 116 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 CFHR3Q02985 330 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 C16orf54Q6UWD8 224 aa8.43□□□□□ -1.06
RNF43-203ENST00000577716 AJUBAQ96IF1 538 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms