RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PFN1P07737 140 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 NBEAP1P0C6P0 100 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 HNRNPA3P51991 378 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 SERF2P84101 59 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 LELP1Q5T871 98 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 ALKAL2Q6UX46 152 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 OR5C1Q8NGR4 320 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 WFDC1Q9HC57 220 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 UQCC1Q9NVA1 299 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 NAGKQ9UJ70 344 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 TNXBP22105 4242 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 IGHV3-73A0A0B4J1V6 119 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 UBE2L5PA0A1B0GUS4 154 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 RAB19A4D1S5 217 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 M0R2P5 195 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 BLOC1S1P78537 153 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 Q6AWC8 147 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 UQCC3Q6UW78 93 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 MIR17HGQ75NE6 70 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 DAZ4Q86SG3 579 aaKnown RBP6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 FAM167A-AS1Q96KT0 104 aa6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 DAZ3Q9NR90 486 aaKnown RBP6.62□□□□□ -1.35
NPLOC4-220ENST00000576940 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 TRBV7-9A0A0J9YWB2 115 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 OR10J4P0C629 311 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 LAGE3Q14657 143 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 TDRG1Q3Y452 100 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 TMED6Q8WW62 240 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 DNAJC30Q96LL9 226 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 WDR61Q9GZS3 305 aaKnown RBP6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 OR51M1Q9H341 326 aa6.61□□□□□ -1.35
NPLOC4-220ENST00000576940 TRAV8-3A0A0A6YYJ7 113 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 FBLL1A6NHQ2 334 aaKnown RBP6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 FGF7P21781 194 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 ATP6V0CP27449 155 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 RANP62826 216 aaKnown RBP6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 PRADC1Q9BSG0 188 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 SMDT1Q9H4I9 107 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 KCNIP2Q9NS61 270 aa6.6□□□□□ -1.35
NPLOC4-220ENST00000576940 TRBV6-4A0A1B0GX49 114 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 MBP02144 154 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 TYMSP04818 313 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 CSN1S1P47710 185 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 ACOT6Q3I5F7 207 aaPredicted RBP6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 CFAP126Q5VTH2 177 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 Q8N976 141 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 PAXXQ9BUH6 204 aa6.59□□□□□ -1.35
NPLOC4-220ENST00000576940 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 DIRC3C9JPN6 131 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 TEX46H3BTG2 121 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 RS1O15537 224 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 RHOHQ15669 191 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 MBD3L1Q8WWY6 194 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 NPCDR1Q9BY65 106 aa6.58□□□□□ -1.36
NPLOC4-220ENST00000576940 IGKV2D-24A0A075B6R9 120 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 GGTLC3B5MD39 225 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 KRBOX1C9JBD0 128 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 C17orf112F2Z3M2 114 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 FAM74A1Q5RGS3 127 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 COMMD7Q86VX2 200 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 SLC7A5P1Q8MH63 180 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 SCGB1C1Q8TD33 95 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 TVP23CQ96ET8 276 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 SMIM3Q9BZL3 60 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 Q9UF83 564 aa6.57□□□□□ -1.36
NPLOC4-220ENST00000576940 TRAV21A0A0B4J279 112 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 GAGE12JA6NER3 117 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 F6UZH7 168 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 TAGLN2P37802 199 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 GAGE1Q13065 139 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 GAGE4Q13068 117 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 GAGE5Q13069 117 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 TOR2AQ5JU69 321 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 HSD17B11Q8NBQ5 300 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 SH3BGRL3Q9H299 93 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 SDF2L1Q9HCN8 221 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 LENEPQ9Y5L5 61 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 COX11Q9Y6N1 276 aa6.56□□□□□ -1.36
NPLOC4-220ENST00000576940 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 OR7C2O60412 319 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 EIF3GO75821 320 aaKnown RBP eCLIP6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 IGLV2-11P01706 119 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 C10orf91Q5T1B1 145 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 AKR1C8PQ5T2L2 129 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 KLK12Q9UKR0 248 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 RPH3ALQ9UNE2 315 aa6.55□□□□□ -1.36
NPLOC4-220ENST00000576940 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 PGPA6NDG6 321 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 CIDEAO60543 219 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms