RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 BIN3Q9NQY0 253 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 IL36BQ9NZH7 164 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 TMSB15BA0A087X1C1 80 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 RAB19A4D1S5 217 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 GRIFINA4D1Z8 144 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 CIDEAO60543 219 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 SFTA3P0C7M3 94 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 MGST1P10620 155 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 FAM3BP58499 235 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 FHL2Q14192 279 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 TEX261Q6UWH6 196 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 SYT8Q8NBV8 401 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 DAZAP1Q96EP5 407 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 ZNF479Q96JC4 524 aa10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 EIF5A2Q9GZV4 153 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-207ENST00000575639 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
TRAPPC1-207ENST00000575639 H3BVH4 76 aa10.45□□□□□ -0.74
TRAPPC1-207ENST00000575639 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
TRAPPC1-207ENST00000575639 ZNF506Q5JVG8 444 aa10.45□□□□□ -0.74
TRAPPC1-207ENST00000575639 PGPEP1LA6NFU8 196 aa10.44□□□□□ -0.74
TRAPPC1-207ENST00000575639 CRYBA4P53673 196 aa10.44□□□□□ -0.74
TRAPPC1-207ENST00000575639 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
TRAPPC1-207ENST00000575639 PHLDA3Q9Y5J5 127 aa10.44□□□□□ -0.74
TRAPPC1-207ENST00000575639 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
TRAPPC1-207ENST00000575639 A8MWV9 139 aa10.43□□□□□ -0.74
TRAPPC1-207ENST00000575639 RS1O15537 224 aa10.43□□□□□ -0.74
TRAPPC1-207ENST00000575639 CXCL1P09341 107 aa10.43□□□□□ -0.74
TRAPPC1-207ENST00000575639 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
TRAPPC1-207ENST00000575639 CFAP126Q5VTH2 177 aa10.43□□□□□ -0.74
TRAPPC1-207ENST00000575639 PCNPQ8WW12 178 aaKnown RBP10.43□□□□□ -0.74
TRAPPC1-207ENST00000575639 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-207ENST00000575639 IGLV2-8P01709 118 aa10.42□□□□□ -0.74
TRAPPC1-207ENST00000575639 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-207ENST00000575639 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
TRAPPC1-207ENST00000575639 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
TRAPPC1-207ENST00000575639 RYR1P21817 5038 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 A0A096LPF7 62 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 XKRY2A2RUG3 117 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 CEBPGP53567 150 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 DMRTA1Q5VZB9 504 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 ZFP82Q8N141 532 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 PARLQ9H300 379 aa10.41□□□□□ -0.74
TRAPPC1-207ENST00000575639 M0R381 172 aa10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 P01737 135 aa10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 GYPEP15421 78 aa10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 GATA1P15976 413 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 ZNF575Q86XF7 245 aa10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 PRADC1Q9BSG0 188 aa10.4□□□□□ -0.74
TRAPPC1-207ENST00000575639 MUC4Q99102 2169 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 IGHV3-73A0A0B4J1V6 119 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 C19orf71A6NCJ1 209 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 SRIP30626 198 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 NEGR1Q7Z3B1 354 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 LINC00588Q9Y4M8 146 aa10.39□□□□□ -0.75
TRAPPC1-207ENST00000575639 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
TRAPPC1-207ENST00000575639 RHODO00212 210 aa10.38□□□□□ -0.75
TRAPPC1-207ENST00000575639 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
TRAPPC1-207ENST00000575639 RHOHQ15669 191 aa10.38□□□□□ -0.75
TRAPPC1-207ENST00000575639 ESRGQ1W209 222 aa10.38□□□□□ -0.75
TRAPPC1-207ENST00000575639 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
TRAPPC1-207ENST00000575639 K7EQD1 137 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 RAB14P61106 215 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 PEA15Q15121 130 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 SPANXN1Q5VSR9 72 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 SLC25A29Q8N8R3 303 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 SMIM7Q9BQ49 75 aa10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC1-207ENST00000575639 IGLV2-18A0A075B6J9 118 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 SNAI2O43623 268 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 SRP19P09132 144 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 SMDT1Q9H4I9 107 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 JPT2Q9H910 190 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 LY96Q9Y6Y9 160 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
TRAPPC1-207ENST00000575639 ZNF727A8MUV8 499 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 M0R2N4 97 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 FAM74A4Q5TZK3 123 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 FER1L6-AS1Q8NA97 138 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 Q9H8V8 135 aa10.35□□□□□ -0.75
TRAPPC1-207ENST00000575639 A0A087WWL8 130 aa10.34□□□□□ -0.75
TRAPPC1-207ENST00000575639 A0A1W2PPQ1 181 aa10.34□□□□□ -0.75
TRAPPC1-207ENST00000575639 F2Z2F3 143 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms