RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CFAP126Q5VTH2 177 aa14.29□□□□□ -0.12
CHMP6-204ENST00000572778 ALKAL2Q6UX46 152 aa14.29□□□□□ -0.12
CHMP6-204ENST00000572778 PCNPQ8WW12 178 aaKnown RBP14.29□□□□□ -0.12
CHMP6-204ENST00000572778 PTH2Q96A98 100 aa14.29□□□□□ -0.12
CHMP6-204ENST00000572778 TXNDC17Q9BRA2 123 aa14.29□□□□□ -0.12
CHMP6-204ENST00000572778 Q9H8V8 135 aa14.29□□□□□ -0.12
CHMP6-204ENST00000572778 MUC4Q99102 2169 aa14.29□□□□□ -0.12
CHMP6-204ENST00000572778 DNAH2Q9P225 4427 aa14.28□□□□□ -0.12
CHMP6-204ENST00000572778 H3BVH4 76 aa14.28□□□□□ -0.12
CHMP6-204ENST00000572778 GYPEP15421 78 aa14.28□□□□□ -0.12
CHMP6-204ENST00000572778 C11orf52Q96A22 123 aa14.28□□□□□ -0.12
CHMP6-204ENST00000572778 DERL1Q9BUN8 251 aa14.28□□□□□ -0.12
CHMP6-204ENST00000572778 IL36BQ9NZH7 164 aa14.28□□□□□ -0.12
CHMP6-204ENST00000572778 MRPS16Q9Y3D3 137 aaKnown RBP14.28□□□□□ -0.12
CHMP6-204ENST00000572778 IGHV3-73A0A0B4J1V6 119 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 NBDYA0A0U1RRE5 68 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 K7EQD1 137 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 ARMS2P0C7Q2 107 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 SRIP30626 198 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 MEF2BQ02080 365 aaPredicted RBP14.27□□□□□ -0.13
CHMP6-204ENST00000572778 LINC01559Q495D7 138 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 PRR27Q6MZM9 219 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 MLST8Q9BVC4 326 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 BOLA1Q9Y3E2 137 aa14.27□□□□□ -0.13
CHMP6-204ENST00000572778 CIDEAO60543 219 aa14.26□□□□□ -0.13
CHMP6-204ENST00000572778 GATA1P15976 413 aaPredicted RBP14.26□□□□□ -0.13
CHMP6-204ENST00000572778 DNLZQ5SXM8 178 aa14.26□□□□□ -0.13
CHMP6-204ENST00000572778 NEGR1Q7Z3B1 354 aa14.26□□□□□ -0.13
CHMP6-204ENST00000572778 UPK3BQ9BT76 320 aa14.26□□□□□ -0.13
CHMP6-204ENST00000572778 NACAE9PAV3 2078 aa14.26□□□□□ -0.13
CHMP6-204ENST00000572778 PDE6DO43924 150 aa14.25□□□□□ -0.13
CHMP6-204ENST00000572778 BCL2P10415 239 aa14.25□□□□□ -0.13
CHMP6-204ENST00000572778 LINC00336Q6ZUF6 198 aa14.25□□□□□ -0.13
CHMP6-204ENST00000572778 VAX2Q9UIW0 290 aa14.25□□□□□ -0.13
CHMP6-204ENST00000572778 LOC100131303A0A0U1RQF7 123 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 RTL8CO15255 209 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 BLOC1S1P78537 153 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 SOHLH1Q5JUK2 328 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 C1orf134Q5TEV5 83 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 SYT8Q8NBV8 401 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 MED9Q9NWA0 146 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 PHLDA3Q9Y5J5 127 aa14.24□□□□□ -0.13
CHMP6-204ENST00000572778 A8MWV9 139 aa14.23□□□□□ -0.13
CHMP6-204ENST00000572778 RPL19P84098 196 aaKnown RBP14.23□□□□□ -0.13
CHMP6-204ENST00000572778 CENPWQ5EE01 88 aa14.23□□□□□ -0.13
CHMP6-204ENST00000572778 DMRTA1Q5VZB9 504 aa14.23□□□□□ -0.13
CHMP6-204ENST00000572778 LYPD5Q6UWN5 251 aa14.23□□□□□ -0.13
CHMP6-204ENST00000572778 ZNF575Q86XF7 245 aa14.23□□□□□ -0.13
CHMP6-204ENST00000572778 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
CHMP6-204ENST00000572778 FRAS1Q86XX4 4008 aa14.22□□□□□ -0.13
CHMP6-204ENST00000572778 RAB19A4D1S5 217 aa14.22□□□□□ -0.13
CHMP6-204ENST00000572778 MGST1P10620 155 aaKnown RBP14.22□□□□□ -0.13
CHMP6-204ENST00000572778 TAGLN2P37802 199 aaKnown RBP14.22□□□□□ -0.13
CHMP6-204ENST00000572778 PIK3CD-AS1Q5SR53 167 aa14.22□□□□□ -0.13
CHMP6-204ENST00000572778 PRADC1Q9BSG0 188 aa14.22□□□□□ -0.13
CHMP6-204ENST00000572778 PARLQ9H300 379 aa14.22□□□□□ -0.13
CHMP6-204ENST00000572778 JPT2Q9H910 190 aa14.22□□□□□ -0.13
CHMP6-204ENST00000572778 TRBV6-4A0A1B0GX49 114 aa14.21□□□□□ -0.13
CHMP6-204ENST00000572778 PRSS29PA6NIE9 313 aa14.21□□□□□ -0.13
CHMP6-204ENST00000572778 M0R381 172 aa14.21□□□□□ -0.13
CHMP6-204ENST00000572778 NXPH4O95158 308 aa14.21□□□□□ -0.13
CHMP6-204ENST00000572778 GNG4P50150 75 aa14.21□□□□□ -0.13
CHMP6-204ENST00000572778 RHOHQ15669 191 aa14.21□□□□□ -0.13
CHMP6-204ENST00000572778 SIVA1O15304 175 aa14.2□□□□□ -0.14
CHMP6-204ENST00000572778 TTC32Q5I0X7 151 aa14.2□□□□□ -0.14
CHMP6-204ENST00000572778 SCRT2Q9NQ03 307 aa14.2□□□□□ -0.14
CHMP6-204ENST00000572778 ZFP2Q6ZN57 461 aa14.19□□□□□ -0.14
CHMP6-204ENST00000572778 SAMD10Q9BYL1 202 aa14.19□□□□□ -0.14
CHMP6-204ENST00000572778 BIRC6Q9NR09 4857 aa14.18□□□□□ -0.14
CHMP6-204ENST00000572778 IGLV2-8P01709 118 aa14.18□□□□□ -0.14
CHMP6-204ENST00000572778 Q6ZSN1 163 aa14.18□□□□□ -0.14
CHMP6-204ENST00000572778 SH2D6Q7Z4S9 175 aa14.18□□□□□ -0.14
CHMP6-204ENST00000572778 ZFP82Q8N141 532 aa14.18□□□□□ -0.14
CHMP6-204ENST00000572778 C6orf223Q8N319 242 aa14.18□□□□□ -0.14
CHMP6-204ENST00000572778 DAZAP1Q96EP5 407 aaKnown RBP14.18□□□□□ -0.14
CHMP6-204ENST00000572778 CXCL1P09341 107 aa14.17□□□□□ -0.14
CHMP6-204ENST00000572778 MED14OSP0DP75 135 aa14.17□□□□□ -0.14
CHMP6-204ENST00000572778 FAM74A4Q5TZK3 123 aa14.17□□□□□ -0.14
CHMP6-204ENST00000572778 SMIM12Q96EX1 92 aa14.17□□□□□ -0.14
CHMP6-204ENST00000572778 KRTAP1-5Q9BYS1 174 aa14.17□□□□□ -0.14
CHMP6-204ENST00000572778 DNAH17Q9UFH2 4485 aa14.17□□□□□ -0.14
CHMP6-204ENST00000572778 RBFOX3A6NFN3 312 aa14.16□□□□□ -0.14
CHMP6-204ENST00000572778 SFRP2Q96HF1 295 aa14.16□□□□□ -0.14
CHMP6-204ENST00000572778 FAT2Q9NYQ8 4349 aa14.16□□□□□ -0.14
CHMP6-204ENST00000572778 TRBV20OR9-2A0A075B6H5 130 aa14.15□□□□□ -0.14
CHMP6-204ENST00000572778 A0A087WWL8 130 aa14.15□□□□□ -0.14
CHMP6-204ENST00000572778 A0A1W2PPQ1 181 aa14.15□□□□□ -0.14
CHMP6-204ENST00000572778 RHODO00212 210 aa14.15□□□□□ -0.14
CHMP6-204ENST00000572778 UFSP1Q6NVU6 142 aa14.15□□□□□ -0.14
CHMP6-204ENST00000572778 LYPD6BQ8NI32 183 aa14.15□□□□□ -0.14
CHMP6-204ENST00000572778 OR2D3Q8NGH3 330 aa14.14□□□□□ -0.15
CHMP6-204ENST00000572778 OR10AG1Q8NH19 301 aa14.14□□□□□ -0.15
CHMP6-204ENST00000572778 MUC21A0A0G2JKD1 596 aa14.13□□□□□ -0.15
CHMP6-204ENST00000572778 MUC21A0A140T8X8 626 aa14.13□□□□□ -0.15
CHMP6-204ENST00000572778 SSTP61278 116 aa14.13□□□□□ -0.15
CHMP6-204ENST00000572778 SPANXN1Q5VSR9 72 aa14.13□□□□□ -0.15
CHMP6-204ENST00000572778 WFDC10BQ8IUB3 73 aa14.13□□□□□ -0.15
CHMP6-204ENST00000572778 C14orf178Q8N769 122 aaPredicted RBP14.13□□□□□ -0.15
CHMP6-204ENST00000572778 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
CHMP6-204ENST00000572778 C19orf71A6NCJ1 209 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms