RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 PPBPP02775 128 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 RBMY1DP0C7P1 496 aaKnown RBP4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 AMTP48728 403 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 JOSD1Q15040 202 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 ZNF124Q15973 351 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 ODF3L2Q3SX64 289 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 PYY3Q5JQD4 70 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 SPANXN1Q5VSR9 72 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 SMIM15Q7Z3B0 74 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 LINC00482Q8N8I6 264 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 CHCHD1Q96BP2 118 aaKnown RBP4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 PRELID3AQ96N28 172 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 SAMD10Q9BYL1 202 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 PHLDA3Q9Y5J5 127 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 TEP1Q99973 2627 aaKnown RBP4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 IGHV3-16A0A0C4DH30 117 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 OR11H12B2RN74 326 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 D6R8Y8 96 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 HSBP1O75506 76 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 PF4P02776 101 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 CD7P09564 240 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 LINC00614P0C842 121 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 PMCHP20382 165 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 EVI2AP22794 236 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 CKS2P33552 79 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 FXYD7P58549 80 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 BEAN1Q3B7T3 259 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 RNASEKQ6P5S7 137 aaKnown RBP4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 FAM110AQ9BQ89 295 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 C20orf144Q9BQM9 153 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 NIT2Q9NQR4 276 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 LAMTOR2Q9Y2Q5 125 aa4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 TIMM8BQ9Y5J9 83 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC1-204ENST00000571947 TRGV11A0A075B6L2 103 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 SMKR1H3BMG3 65 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 M0R381 172 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 WIPF1O43516 503 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 NPYP01303 97 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 RBMY1A1P0DJD3 496 aaKnown RBP4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 RBMY1CP0DJD4 496 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 Q6ZWC4 215 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 TRPT1Q86TN4 253 aaKnown RBP4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 STHQ8IWL8 128 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 FAM19A2Q8N3H0 131 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 CITED1Q99966 193 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 LINC00467Q9BRT7 94 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 DPH3P1Q9H4G8 78 aa4.51□□□□□ -1.69
TRAPPC1-204ENST00000571947 PRSS47A8MTI9 375 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 SPRY2O43597 315 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 GAS8-AS1O95177 125 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 TNFRSF6BO95407 300 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 NCR2O95944 276 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 INSP01308 110 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 IFI27P40305 119 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 INSL3P51460 131 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 C9orf66Q5T8R8 295 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 FA2HQ7L5A8 372 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 Q8N1Y9 231 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 DEFB125Q8N687 156 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 POM121L12Q8N7R1 296 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 SYT8Q8NBV8 401 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 MRAP2Q96G30 205 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 AP1S3Q96PC3 154 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 MAP1LC3AQ9H492 121 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 GSN-AS1Q9NRJ2 163 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 C19orf73Q9NVV2 129 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 KIF25-AS1Q9Y6Z4 181 aa4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 FLNBO75369 2602 aaKnown RBP4.5□□□□□ -1.69
TRAPPC1-204ENST00000571947 IGHV1-24A0A0C4DH33 117 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 LOC389332A0A1B0GUA5 103 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 LINC01546A6NGU7 62 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 CBY3A6NI87 242 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 CYSRT1A8MQ03 144 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 SCGB1D1O95968 90 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 LINC00315P59091 139 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 CDPF1Q6NVV7 123 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 C14orf178Q8N769 122 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 Q8N8P6 123 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 NRACQ8N912 160 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 PTH2Q96A98 100 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 NXT2Q9NPJ8 142 aaKnown RBP4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 AP5S1Q9NUS5 200 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 JMJD1CQ15652 2540 aa4.49□□□□□ -1.69
TRAPPC1-204ENST00000571947 CUBNO60494 3623 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 IGLV2-18A0A075B6J9 118 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 MGPP08493 103 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 SMIM17P0DL12 118 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 KRTDAPP60985 99 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 S100A12P80511 92 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 ZNF415Q09FC8 603 aa4.48□□□□□ -1.69
TRAPPC1-204ENST00000571947 PMCHL1Q16048 86 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms