RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 IQCJQ1A5X6 159 aa14.33□□□□□ -0.11
RPAIN-210ENST00000571613 PRELID3AQ96N28 172 aa14.33□□□□□ -0.11
RPAIN-210ENST00000571613 TIMM8BQ9Y5J9 83 aaPredicted RBP14.33□□□□□ -0.11
RPAIN-210ENST00000571613 D6R8Y8 96 aa14.33□□□□□ -0.12
RPAIN-210ENST00000571613 NXPH4O95158 308 aa14.33□□□□□ -0.12
RPAIN-210ENST00000571613 C9orf66Q5T8R8 295 aa14.33□□□□□ -0.12
RPAIN-210ENST00000571613 RCHY1Q96PM5 261 aa14.33□□□□□ -0.12
RPAIN-210ENST00000571613 CRXO43186 299 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-210ENST00000571613 ZNF124Q15973 351 aa14.32□□□□□ -0.12
RPAIN-210ENST00000571613 NIT1Q86X76 327 aa14.32□□□□□ -0.12
RPAIN-210ENST00000571613 RNF185Q96GF1 192 aa14.32□□□□□ -0.12
RPAIN-210ENST00000571613 C12orf57Q99622 126 aa14.32□□□□□ -0.12
RPAIN-210ENST00000571613 LINC00467Q9BRT7 94 aa14.32□□□□□ -0.12
RPAIN-210ENST00000571613 IGHV3-16A0A0C4DH30 117 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
RPAIN-210ENST00000571613 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
RPAIN-210ENST00000571613 M0R381 172 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 INSP01308 110 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
RPAIN-210ENST00000571613 LINC00614P0C842 121 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 PMCHP20382 165 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 AMTP48728 403 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 TRPT1Q86TN4 253 aaKnown RBP14.31□□□□□ -0.12
RPAIN-210ENST00000571613 SYT8Q8NBV8 401 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 AP1S3Q96PC3 154 aa14.31□□□□□ -0.12
RPAIN-210ENST00000571613 EVI2AP22794 236 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 PRR31Q5SQ13 230 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 RNASEKQ6P5S7 137 aaKnown RBP14.3□□□□□ -0.12
RPAIN-210ENST00000571613 Q8N1Y9 231 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 MCRIP2Q9BUT9 160 aaKnown RBP14.3□□□□□ -0.12
RPAIN-210ENST00000571613 AGRNO00468 2067 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 FXYD7P58549 80 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 DPH3P1Q9H4G8 78 aa14.3□□□□□ -0.12
RPAIN-210ENST00000571613 PRSS3P2Q8NHM4 247 aa14.29□□□□□ -0.12
RPAIN-210ENST00000571613 MRAP2Q96G30 205 aa14.29□□□□□ -0.12
RPAIN-210ENST00000571613 CBY3A6NI87 242 aa14.28□□□□□ -0.12
RPAIN-210ENST00000571613 SMIM17P0DL12 118 aa14.27□□□□□ -0.12
RPAIN-210ENST00000571613 JOSD1Q15040 202 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-210ENST00000571613 PYY3Q5JQD4 70 aa14.27□□□□□ -0.12
RPAIN-210ENST00000571613 FA2HQ7L5A8 372 aa14.26□□□□□ -0.13
RPAIN-210ENST00000571613 MAP1LC3AQ9H492 121 aa14.26□□□□□ -0.13
RPAIN-210ENST00000571613 BAHCC1Q9P281 2608 aa14.26□□□□□ -0.13
RPAIN-210ENST00000571613 AP5S1Q9NUS5 200 aa14.26□□□□□ -0.13
RPAIN-210ENST00000571613 C19orf73Q9NVV2 129 aa14.26□□□□□ -0.13
RPAIN-210ENST00000571613 PPP1R17O96001 155 aa14.25□□□□□ -0.13
RPAIN-210ENST00000571613 MORN3Q6PF18 240 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-210ENST00000571613 URB1-AS1Q96HZ7 61 aa14.25□□□□□ -0.13
RPAIN-210ENST00000571613 LINC01587Q99440 93 aa14.25□□□□□ -0.13
RPAIN-210ENST00000571613 C1QTNF4Q9BXJ3 329 aa14.25□□□□□ -0.13
RPAIN-210ENST00000571613 GSN-AS1Q9NRJ2 163 aa14.25□□□□□ -0.13
RPAIN-210ENST00000571613 MDFICQ9P1T7 246 aa14.25□□□□□ -0.13
RPAIN-210ENST00000571613 RBMY1A1P0DJD3 496 aaKnown RBP14.24□□□□□ -0.13
RPAIN-210ENST00000571613 RBMY1CP0DJD4 496 aa14.24□□□□□ -0.13
RPAIN-210ENST00000571613 ZNF415Q09FC8 603 aa14.24□□□□□ -0.13
RPAIN-210ENST00000571613 RBMY1FQ15415 496 aaKnown RBP14.24□□□□□ -0.13
RPAIN-210ENST00000571613 PIK3CD-AS1Q5SR53 167 aa14.24□□□□□ -0.13
RPAIN-210ENST00000571613 GTSCR1Q86UQ5 136 aa14.24□□□□□ -0.13
RPAIN-210ENST00000571613 TNFRSF6BO95407 300 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 DEFB125Q8N687 156 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 C14orf178Q8N769 122 aaPredicted RBP14.23□□□□□ -0.13
RPAIN-210ENST00000571613 WFDC9Q8NEX5 89 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 PTH2Q96A98 100 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 NXT2Q9NPJ8 142 aaKnown RBP14.23□□□□□ -0.13
RPAIN-210ENST00000571613 SMKR1H3BMG3 65 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 NPYP01303 97 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 FAM19A2Q8N3H0 131 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 POM121L12Q8N7R1 296 aa14.23□□□□□ -0.13
RPAIN-210ENST00000571613 PRSS47A8MTI9 375 aa14.22□□□□□ -0.13
RPAIN-210ENST00000571613 NCR2O95944 276 aa14.22□□□□□ -0.13
RPAIN-210ENST00000571613 TMEM208Q9BTX3 173 aa14.22□□□□□ -0.13
RPAIN-210ENST00000571613 ZNF747Q9BV97 191 aa14.22□□□□□ -0.13
RPAIN-210ENST00000571613 NIT2Q9NQR4 276 aa14.22□□□□□ -0.13
RPAIN-210ENST00000571613 XCL2Q9UBD3 114 aa14.22□□□□□ -0.13
RPAIN-210ENST00000571613 IFI27P40305 119 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-210ENST00000571613 Q6ZWC4 215 aa14.21□□□□□ -0.13
RPAIN-210ENST00000571613 SPXQ9BT56 116 aa14.21□□□□□ -0.13
RPAIN-210ENST00000571613 LOC389332A0A1B0GUA5 103 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 KRTAP24-1Q3LI83 254 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 HTN1P15515 57 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 ZNF876PQ49A33 203 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 NDUFAF3Q9BU61 184 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 GOLT1BQ9Y3E0 138 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 KIF25-AS1Q9Y6Z4 181 aa14.2□□□□□ -0.14
RPAIN-210ENST00000571613 IGHV1-24A0A0C4DH33 117 aa14.19□□□□□ -0.14
RPAIN-210ENST00000571613 M0R2P5 195 aa14.19□□□□□ -0.14
RPAIN-210ENST00000571613 SPRY2O43597 315 aa14.19□□□□□ -0.14
RPAIN-210ENST00000571613 MGPP08493 103 aa14.19□□□□□ -0.14
RPAIN-210ENST00000571613 NRACQ8N912 160 aa14.19□□□□□ -0.14
RPAIN-210ENST00000571613 C20orf78Q9BR46 151 aa14.19□□□□□ -0.14
RPAIN-210ENST00000571613 LINC01546A6NGU7 62 aa14.18□□□□□ -0.14
RPAIN-210ENST00000571613 CYSRT1A8MQ03 144 aa14.18□□□□□ -0.14
RPAIN-210ENST00000571613 LEPROTL1O95214 131 aa14.18□□□□□ -0.14
RPAIN-210ENST00000571613 HSPB8Q9UJY1 196 aa14.18□□□□□ -0.14
RPAIN-210ENST00000571613 SCGB1D1O95968 90 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 S100A12P80511 92 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 C1orf158Q8N1D5 194 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 Q8N8P6 123 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 TMEM158Q8WZ71 300 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 WIPF1O43516 503 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms