RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
CCDC40-205ENST00000571028 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.9
CCDC40-205ENST00000571028 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
CCDC40-205ENST00000571028 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
CCDC40-205ENST00000571028 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
CCDC40-205ENST00000571028 TDRG1Q3Y452 100 aa9.4□□□□□ -0.9
CCDC40-205ENST00000571028 DAZAP1Q96EP5 407 aaKnown RBP9.4□□□□□ -0.9
CCDC40-205ENST00000571028 MLST8Q9BVC4 326 aa9.4□□□□□ -0.9
CCDC40-205ENST00000571028 C9JCJ5 164 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 C9JQL5 133 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 F5H768 121 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 IGLV2-8P01709 118 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 ASIPP42127 132 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
CCDC40-205ENST00000571028 LGALS9BQ3B8N2 356 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 SMIM7Q9BQ49 75 aa9.39□□□□□ -0.91
CCDC40-205ENST00000571028 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 C16orf90A8MZG2 172 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 KRBOX1C9JBD0 128 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 SPINK4O60575 86 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 CLLU1Q5K131 121 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 OCC1Q8TAD7 63 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 SPXQ9BT56 116 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 NDUFAF3Q9BU61 184 aa9.38□□□□□ -0.91
CCDC40-205ENST00000571028 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
CCDC40-205ENST00000571028 H3BVH4 76 aa9.37□□□□□ -0.91
CCDC40-205ENST00000571028 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
CCDC40-205ENST00000571028 ATP5G1P05496 136 aa9.37□□□□□ -0.91
CCDC40-205ENST00000571028 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
CCDC40-205ENST00000571028 M0R2P5 195 aa9.36□□□□□ -0.91
CCDC40-205ENST00000571028 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
CCDC40-205ENST00000571028 SSTP61278 116 aa9.36□□□□□ -0.91
CCDC40-205ENST00000571028 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
CCDC40-205ENST00000571028 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
CCDC40-205ENST00000571028 PKD1P98161 4303 aa9.36□□□□□ -0.91
CCDC40-205ENST00000571028 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
CCDC40-205ENST00000571028 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 K7EN84 100 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 P01737 135 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 ARMS2P0C7Q2 107 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 LINC00612Q8N6U2 182 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
CCDC40-205ENST00000571028 RNASE7Q9H1E1 156 aaKnown RBP9.35□□□□□ -0.91
CCDC40-205ENST00000571028 HSPG2P98160 4391 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 SFTA3P0C7M3 94 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 GZMBP10144 247 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
CCDC40-205ENST00000571028 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 A0A0J9YY99 117 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 C19orf71A6NCJ1 209 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 M0R381 172 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 TMEM241Q24JQ0 296 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 OR4C5Q8NGB2 326 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 PHLDA3Q9Y5J5 127 aa9.33□□□□□ -0.92
CCDC40-205ENST00000571028 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 NDUFS6O75380 124 aaKnown RBP9.32□□□□□ -0.92
CCDC40-205ENST00000571028 HOXA5P20719 270 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 ADIRFQ15847 76 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 TMEM88Q6PEY1 159 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 Q8N1X5 172 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 RASL10AQ92737 203 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 ZNF479Q96JC4 524 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 SCRT2Q9NQ03 307 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 IL36BQ9NZH7 164 aa9.32□□□□□ -0.92
CCDC40-205ENST00000571028 GATCO43716 136 aaKnown RBP9.31□□□□□ -0.92
CCDC40-205ENST00000571028 ERVFC1-1P60608 527 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 RPS20P60866 119 aaKnown RBP9.31□□□□□ -0.92
CCDC40-205ENST00000571028 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 COMMD7Q86VX2 200 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 SYT8Q8NBV8 401 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 SMDT1Q9H4I9 107 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 RPP21Q9H633 154 aaKnown RBP9.31□□□□□ -0.92
CCDC40-205ENST00000571028 JPT2Q9H910 190 aa9.31□□□□□ -0.92
CCDC40-205ENST00000571028 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 XKRY2A2RUG3 117 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 NUDT3O95989 172 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 DNLZQ5SXM8 178 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 SPANXN1Q5VSR9 72 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 Q6ZR54 194 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 FER1L6-AS1Q8NA97 138 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 OR10AG1Q8NH19 301 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 NAT8Q9UHE5 227 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 LY96Q9Y6Y9 160 aa9.3□□□□□ -0.92
CCDC40-205ENST00000571028 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
CCDC40-205ENST00000571028 RPL23P62829 140 aaKnown RBP9.29□□□□□ -0.92
CCDC40-205ENST00000571028 RS1O15537 224 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 PAX4O43316 350 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 CXCL1P09341 107 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 FHL2Q14192 279 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms