RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GAGE4Q13068 117 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 GAGE5Q13069 117 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 LINC01620Q4KN68 170 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 GAGE13Q4V321 117 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 LINC00299Q6ZSB3 139 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 C5orf17Q8NAS9 161 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 OR2T35Q8NGX2 323 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 RAB24Q969Q5 203 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 C9orf85Q96MD7 179 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 GTSF1LQ9H1H1 148 aa5.72□□□□□ -1.49
CTDNEP1-203ENST00000570385 DNAH8Q96JB1 4490 aa5.71□□□□□ -1.49
CTDNEP1-203ENST00000570385 TRAV34A0A0B4J273 112 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 GGTLC3B5MD39 225 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 RNASE3P12724 160 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 GCHFRP30047 84 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 FLI1Q01543 452 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 LGALSLQ3ZCW2 172 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 SMUG1Q53HV7 270 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 DAZ4Q86SG3 579 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 ARL6IP6Q8N6S5 226 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 LINC00479Q96M42 142 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 SAMD10Q9BYL1 202 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 JPT2Q9H910 190 aa5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 DAZ3Q9NR90 486 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-203ENST00000570385 IGKV3D-20A0A0C4DH25 116 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 K7EQM0 130 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 STAG3L2P0CL84 134 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 STAG3L3P0CL85 134 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 MGST1P10620 155 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 S100A4P26447 101 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 ATP6V0CP27449 155 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 ZFP69Q49AA0 526 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 C14orf178Q8N769 122 aaPredicted RBP5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 DNAJC30Q96LL9 226 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 TM2D2Q9BX73 214 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 SH3BGRL3Q9H299 93 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 PARLQ9H300 379 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 EPDR1Q9UM22 224 aa5.7□□□□□ -1.5
CTDNEP1-203ENST00000570385 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 SERTM2A0A1B0GWG4 89 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 CIDEAO60543 219 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 DEFA1P59665 94 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 DEFA3P59666 94 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 LINC00528Q8N1L1 170 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 CYB561D1Q8N8Q1 229 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 ALG5Q9Y673 324 aa5.69□□□□□ -1.5
CTDNEP1-203ENST00000570385 GRIFINA4D1Z8 144 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 H3BVH4 76 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 M0R036 132 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 CXorf1O96002 111 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 IFNA7P01567 189 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 UBE2G2P60604 165 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 LAGE3Q14657 143 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 Q5BKY6 102 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 SUN5Q8TC36 379 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 ACTR3CQ9C0K3 210 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 ARL2-SNX15V9GYD0 113 aa5.68□□□□□ -1.5
CTDNEP1-203ENST00000570385 A0A087WWL8 130 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 TRAV8-3A0A0A6YYJ7 113 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 A8MWV9 139 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 ASIPP42127 132 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 CRIP1P50238 77 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 SAPCD1Q5SSQ6 148 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 ZFP2Q6ZN57 461 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 PTH2Q96A98 100 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 TMEM167BQ9NRX6 74 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 KLK12Q9UKR0 248 aa5.67□□□□□ -1.5
CTDNEP1-203ENST00000570385 IGKV2D-24A0A075B6R9 120 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 TMSB15BA0A087X1C1 80 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 RBFOX3A6NFN3 312 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 A6NHS1 94 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 FABP5P3A8MUU1 101 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 B4DEV8 164 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 MBP02144 154 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 C1QBP02746 253 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 ARMS2P0C7Q2 107 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 FGF8P55075 233 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 SERF2P84101 59 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 ZNF726P1Q15940 193 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 RPL7L1Q6DKI1 246 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 UFSP1Q6NVU6 142 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 Q6ZSA8 131 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 SCXQ7RTU7 201 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 UBE2WQ96B02 151 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 AQP10Q96PS8 301 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 URGCP-MRPS24S4R325 110 aa5.66□□□□□ -1.5
CTDNEP1-203ENST00000570385 A0A087WWC5 75 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 A0A1W2PRE2 83 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 KRBOX1C9JBD0 128 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 M0R381 172 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 PEX7O00628 323 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 SH2D1AO60880 128 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 TOR2AQ5JU69 321 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 Q86TA4 180 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms