RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, human

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAE1-222	ENST00000569963	OCC1	Q8TAD7	63 aa		13.84	□□□□□ -0.19
NAE1-222	ENST00000569963	LINC00476	Q8WZB0	136 aa		13.84	□□□□□ -0.19
NAE1-222	ENST00000569963	SCRT2	Q9NQ03	307 aa		13.84	□□□□□ -0.19
NAE1-222	ENST00000569963	LY96	Q9Y6Y9	160 aa		13.84	□□□□□ -0.19
NAE1-222	ENST00000569963	TMSB15B	A0A087X1C1	80 aa		13.83	□□□□□ -0.2
NAE1-222	ENST00000569963	CIDEA	O60543	219 aa		13.83	□□□□□ -0.2
NAE1-222	ENST00000569963	MED14OS	P0DP75	135 aa		13.83	□□□□□ -0.2
NAE1-222	ENST00000569963	POM121L12	Q8N7R1	296 aa		13.83	□□□□□ -0.2
NAE1-222	ENST00000569963	OR4C5	Q8NGB2	326 aa		13.83	□□□□□ -0.2
NAE1-222	ENST00000569963		H3BVH4	76 aa		13.82	□□□□□ -0.2
NAE1-222	ENST00000569963	CEBPG	P53567	150 aa		13.82	□□□□□ -0.2
NAE1-222	ENST00000569963	IFITM2	Q01629	132 aa		13.82	□□□□□ -0.2
NAE1-222	ENST00000569963	FHL2	Q14192	279 aa		13.82	□□□□□ -0.2
NAE1-222	ENST00000569963	MUC4	Q99102	2169 aa		13.82	□□□□□ -0.2
NAE1-222	ENST00000569963	TRAV26-1	A0A087WT03	109 aa		13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	RS1	O15537	224 aa		13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	IGHV3-53	P01767	116 aa		13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	RPS20	P60866	119 aa	Known RBP	13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	RPL19	P84098	196 aa	Known RBP	13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	ZNF479	Q96JC4	524 aa		13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	SMIM7	Q9BQ49	75 aa		13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	PRO0255	Q9UI72	69 aa		13.81	□□□□□ -0.2
NAE1-222	ENST00000569963	ZNF727	A8MUV8	499 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963		K7EN84	100 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963		P01737	135 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	FAM74A3	Q4VXF1	159 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	CLLU1	Q5K131	121 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	SYT8	Q8NBV8	401 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	HHLA3	Q9XRX5	114 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	PHLDA3	Q9Y5J5	127 aa		13.8	□□□□□ -0.2
NAE1-222	ENST00000569963	TRGV4	A0A0C4DH28	118 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963		C9JQL5	133 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	LY6G6C	O95867	125 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	SFTA3	P0C7M3	94 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963		P0DMU3	169 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	FAM231A	P0DMU4	169 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	FAM231C	P0DMU5	169 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	SRSF3	P84103	164 aa	Known RBP	13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	CFAP126	Q5VTH2	177 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	NUDT10	Q8NFP7	164 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	OR2D3	Q8NGH3	330 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	NUDT11	Q96G61	164 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963	VSIG2	Q96IQ7	327 aa		13.79	□□□□□ -0.2
NAE1-222	ENST00000569963		A0A0J9YY99	117 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963	XKRY2	A2RUG3	117 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963		A8MWV9	139 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963	SNAI2	O43623	268 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963	OR5AL1	P0C617	328 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963	CRYBA4	P53673	196 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963	DMRTA1	Q5VZB9	504 aa		13.78	□□□□□ -0.2
NAE1-222	ENST00000569963	PAX4	O43316	350 aa		13.77	□□□□□ -0.21
NAE1-222	ENST00000569963	NUDT3	O95989	172 aa		13.77	□□□□□ -0.21
NAE1-222	ENST00000569963	ZFP82	Q8N141	532 aa		13.77	□□□□□ -0.21
NAE1-222	ENST00000569963	NXPH4	O95158	308 aa		13.76	□□□□□ -0.21
NAE1-222	ENST00000569963	ZFP2	Q6ZN57	461 aa		13.76	□□□□□ -0.21
NAE1-222	ENST00000569963	FAM231D	Q6ZW35	169 aa		13.76	□□□□□ -0.21
NAE1-222	ENST00000569963	LINC01551	Q86U37	167 aa		13.76	□□□□□ -0.21
NAE1-222	ENST00000569963	RNASE7	Q9H1E1	156 aa	Known RBP	13.76	□□□□□ -0.21
NAE1-222	ENST00000569963	IGLC6	P0CF74	106 aa		13.75	□□□□□ -0.21
NAE1-222	ENST00000569963	TMEM241	Q24JQ0	296 aa		13.75	□□□□□ -0.21
NAE1-222	ENST00000569963	RNF212	Q495C1	297 aa		13.75	□□□□□ -0.21
NAE1-222	ENST00000569963	SFRP2	Q96HF1	295 aa		13.75	□□□□□ -0.21
NAE1-222	ENST00000569963	ALMS1	Q8TCU4	4167 aa		13.75	□□□□□ -0.21
NAE1-222	ENST00000569963		M0R381	172 aa		13.74	□□□□□ -0.21
NAE1-222	ENST00000569963	GATA1	P15976	413 aa	Predicted RBP	13.74	□□□□□ -0.21
NAE1-222	ENST00000569963	RPP21	Q9H633	154 aa	Known RBP	13.74	□□□□□ -0.21
NAE1-222	ENST00000569963		A0A1W2PPQ1	181 aa		13.73	□□□□□ -0.21
NAE1-222	ENST00000569963		F2Z2F3	143 aa		13.73	□□□□□ -0.21
NAE1-222	ENST00000569963	GZMB	P10144	247 aa		13.73	□□□□□ -0.21
NAE1-222	ENST00000569963	UFSP1	Q6NVU6	142 aa		13.73	□□□□□ -0.21
NAE1-222	ENST00000569963	FER1L6-AS1	Q8NA97	138 aa		13.73	□□□□□ -0.21
NAE1-222	ENST00000569963	OR10AG1	Q8NH19	301 aa		13.73	□□□□□ -0.21
NAE1-222	ENST00000569963	NACA	E9PAV3	2078 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963		A0A096LPF7	62 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	TRBV6-4	A0A1B0GX49	114 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	RHOD	O00212	210 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	SOHLH1	Q5JUK2	328 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	JPT2	Q9H910	190 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	NAT8	Q9UHE5	227 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	ICOS	Q9Y6W8	199 aa		13.72	□□□□□ -0.21
NAE1-222	ENST00000569963	GATC	O43716	136 aa	Known RBP	13.71	□□□□□ -0.21
NAE1-222	ENST00000569963	FAM3B	P58499	235 aa	Predicted RBP	13.71	□□□□□ -0.21
NAE1-222	ENST00000569963	ERVFC1-1	P60608	527 aa		13.71	□□□□□ -0.21
NAE1-222	ENST00000569963	MRPL23	Q16540	153 aa	Known RBP	13.71	□□□□□ -0.21
NAE1-222	ENST00000569963	SPANXN1	Q5VSR9	72 aa		13.71	□□□□□ -0.21
NAE1-222	ENST00000569963	SACS	Q9NZJ4	4579 aa		13.71	□□□□□ -0.22
NAE1-222	ENST00000569963	CRYGD	P07320	174 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	CCL18	P55774	89 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	CACNG7	P62955	275 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	CT83	Q5H943	113 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	WDR73	Q6P4I2	378 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	SLC25A29	Q8N8R3	303 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	SAMD10	Q9BYL1	202 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	OSTC	Q9NRP0	149 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	DNAH1	Q9P2D7	4330 aa		13.7	□□□□□ -0.22
NAE1-222	ENST00000569963	IGHV3-73	A0A0B4J1V6	119 aa		13.69	□□□□□ -0.22
NAE1-222	ENST00000569963		A8MWL6	223 aa		13.69	□□□□□ -0.22
NAE1-222	ENST00000569963	RPL23	P62829	140 aa	Known RBP	13.69	□□□□□ -0.22
NAE1-222	ENST00000569963	UBE2DNL	Q8IWF7	75 aa		13.69	□□□□□ -0.22

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