RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 HSPG2P98160 4391 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 IGHV3OR16-8A0A075B7F1 116 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 TRAV14DV4A0A0A6YYC5 116 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 TMEM235A6NFC5 223 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 I3L2K1 104 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 DEFB4AO15263 64 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 RGS5O15539 181 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 SNAPC5O75971 98 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 PPYP01298 95 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 FABP1P07148 127 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 OR5G3P0C626 314 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 OR4E1P0C645 316 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 P0DMU3 169 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 FAM231AP0DMU4 169 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 FAM231CP0DMU5 169 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 ELK1P19419 428 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 HLA-DMBP28068 263 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 GNG2P59768 71 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF79Q15937 498 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 TMEM241Q24JQ0 296 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 LGALS9BQ3B8N2 356 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 Q56UQ5 140 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 TMEM97Q5BJF2 176 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 AADACL3Q5VUY0 350 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 SLC25A46Q96AG3 418 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 ACY3Q96HD9 319 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 GINS3Q9BRX5 216 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 RPS10P5Q9NQ39 176 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 NDUFB11Q9NX14 153 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 FKBP11Q9NYL4 201 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 PRNDQ9UKY0 176 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 LRP1BQ9NZR2 4599 aa2.06□□□□□ -2.08
CNOT1-221ENST00000569924 APOBP04114 4563 aaKnown RBP2.06□□□□□ -2.08
CNOT1-221ENST00000569924 IGKV3-7A0A075B6H7 116 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.05□□□□□ -2.08
CNOT1-221ENST00000569924 DEFB131BA0A096LNP1 70 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 TRAV8-1A0A0A6YYK1 113 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 IGHV3-21A0A0B4J1V1 117 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 PANO1I0J062 215 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 GNG7O60262 68 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 PGLYRP1O75594 196 aaPredicted RBP2.05□□□□□ -2.08
CNOT1-221ENST00000569924 CXorf1O96002 111 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 MT-CO2P00403 227 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 NPY1RP25929 384 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 PSMB3P49720 205 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 DSCR10P59022 87 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 DEFB131AP59861 70 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 C12orf74Q32Q52 190 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 SP6Q3SY56 376 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 FAM78BQ5VT40 261 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 TOMM20LQ6UXN7 152 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF818PQ6ZRF7 136 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 TCF24Q7RTU0 167 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 ATP5L2Q7Z4Y8 100 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 LINC01551Q86U37 167 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 AKAP14Q86UN6 197 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 TMEM75Q8N9X5 138 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 Q8WTZ3 238 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 DIRAS2Q96HU8 199 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 TSC22D3Q99576 134 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 NDFIP1Q9BT67 221 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 GTSF1LQ9H1H1 148 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 TMEM14BQ9NUH8 114 aa2.05□□□□□ -2.08
CNOT1-221ENST00000569924 RNF213Q63HN8 5207 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 TMEM189A5PLL7 270 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 B4DEV8 164 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 DISC1C4P0D8 188 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 CORTO00230 105 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 GPR31O00270 319 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 KRASP01116 189 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 LTAP01374 205 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 IFNA10P01566 189 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 PTHLHP12272 177 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 ORM2P19652 201 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 NPPCP23582 126 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 CRYBB3P26998 211 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 G6PCP35575 357 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 LPAR6P43657 344 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 RPL5P46777 297 aaKnown RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 AQP4P55087 323 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 FXYD4P59646 89 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 HSPE1P61604 102 aaKnown RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 ERHP84090 104 aaKnown RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 RPL19P84098 196 aaKnown RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 PRCDQ00LT1 54 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 BTN1A1Q13410 526 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 JOSD1Q15040 202 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 ACOT6Q3I5F7 207 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 RNF212Q495C1 297 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 LPCAT3Q6P1A2 487 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 TMED4Q7Z7H5 227 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 FAM24BQ8N5W8 94 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 DCANP1Q8TF63 244 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 GPR82Q96P67 336 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF2Q9BSG1 426 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 MARVELD1Q9BSK0 173 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 TXNL4BQ9NX01 149 aaKnown RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 DMBT1Q9UGM3 2413 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 RABAC1Q9UI14 185 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms