RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 Q6ZR54 194 aa9.57□□□□□ -0.88
HERPUD1-218ENST00000569569 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-218ENST00000569569 PGPEP1LA6NFU8 196 aa9.56□□□□□ -0.88
HERPUD1-218ENST00000569569 CIDEAO60543 219 aa9.56□□□□□ -0.88
HERPUD1-218ENST00000569569 ASIPP42127 132 aa9.56□□□□□ -0.88
HERPUD1-218ENST00000569569 MRPL23Q16540 153 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-218ENST00000569569 DNLZQ5SXM8 178 aa9.56□□□□□ -0.88
HERPUD1-218ENST00000569569 BAGE2Q86Y30 109 aa9.56□□□□□ -0.88
HERPUD1-218ENST00000569569 KRBOX1C9JBD0 128 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 RS1O15537 224 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 IFNA1P01562 189 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 ZNF506Q5JVG8 444 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 LINC00336Q6ZUF6 198 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 NHLRC2Q8NBF2 726 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 MLST8Q9BVC4 326 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 Q9H8V8 135 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 DNAH2Q9P225 4427 aa9.55□□□□□ -0.88
HERPUD1-218ENST00000569569 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
HERPUD1-218ENST00000569569 M0R036 132 aa9.54□□□□□ -0.88
HERPUD1-218ENST00000569569 CFAP126Q5VTH2 177 aa9.54□□□□□ -0.88
HERPUD1-218ENST00000569569 C11orf52Q96A22 123 aa9.54□□□□□ -0.88
HERPUD1-218ENST00000569569 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
HERPUD1-218ENST00000569569 K7EQD1 137 aa9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 ARMS2P0C7Q2 107 aa9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 GYPEP15421 78 aa9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 GATA1P15976 413 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 RPL35P42766 123 aaKnown RBP9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 NEGR1Q7Z3B1 354 aa9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 PCNPQ8WW12 178 aaKnown RBP9.53□□□□□ -0.88
HERPUD1-218ENST00000569569 DNAH17Q9UFH2 4485 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 GRIFINA4D1Z8 144 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 A8MWV9 139 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 H3BVH4 76 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 RTL8CO15255 209 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 PDE6DO43924 150 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 SRIP30626 198 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 TAGLN2P37802 199 aaKnown RBP9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 NKX2-5P52952 324 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 BLOC1S1P78537 153 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 ALKAL2Q6UX46 152 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 ZNF575Q86XF7 245 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
HERPUD1-218ENST00000569569 TMSB15BA0A087X1C1 80 aa9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 BCL2P10415 239 aa9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 SYT8Q8NBV8 401 aa9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 DERL1Q9BUN8 251 aa9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
HERPUD1-218ENST00000569569 IGHV3-73A0A0B4J1V6 119 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 TRBV6-4A0A1B0GX49 114 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 MGST1P10620 155 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 SH2D6Q7Z4S9 175 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 SLC25A29Q8N8R3 303 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 SCRT2Q9NQ03 307 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
HERPUD1-218ENST00000569569 LOC100131303A0A0U1RQF7 123 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 A0A1W2PPQ1 181 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 SIVA1O15304 175 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 CXCL1P09341 107 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 RHOHQ15669 191 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 CENPWQ5EE01 88 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 SMIM12Q96EX1 92 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 PARLQ9H300 379 aa9.49□□□□□ -0.89
HERPUD1-218ENST00000569569 RAB19A4D1S5 217 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 NXPH4O95158 308 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 MED14OSP0DP75 135 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 GNG4P50150 75 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 RPL19P84098 196 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 LYPD6BQ8NI32 183 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 JPT2Q9H910 190 aa9.48□□□□□ -0.89
HERPUD1-218ENST00000569569 FAT2Q9NYQ8 4349 aa9.47□□□□□ -0.89
HERPUD1-218ENST00000569569 M0R381 172 aa9.47□□□□□ -0.89
HERPUD1-218ENST00000569569 UFSP1Q6NVU6 142 aa9.47□□□□□ -0.89
HERPUD1-218ENST00000569569 ZFP82Q8N141 532 aa9.47□□□□□ -0.89
HERPUD1-218ENST00000569569 DAZAP1Q96EP5 407 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-218ENST00000569569 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 J3QL48 77 aa9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 RHODO00212 210 aa9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 SFRP2Q96HF1 295 aa9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 SAMD10Q9BYL1 202 aa9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 BIN3Q9NQY0 253 aa9.46□□□□□ -0.9
HERPUD1-218ENST00000569569 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
HERPUD1-218ENST00000569569 SNAI2O43623 268 aa9.45□□□□□ -0.9
HERPUD1-218ENST00000569569 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms