RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 KRBOX1C9JBD0 128 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 H3BVH4 76 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 M0R036 132 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 SFTA3P0C7M3 94 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 BCL2P10415 239 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 RNASE3P12724 160 aaKnown RBP6.82□□□□□ -1.32
CLN6-209ENST00000569336 SRIP30626 198 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 RPL35P42766 123 aaKnown RBP6.82□□□□□ -1.32
CLN6-209ENST00000569336 BLOC1S1P78537 153 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 TTC32Q5I0X7 151 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 ZNF506Q5JVG8 444 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 DNLZQ5SXM8 178 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 ALKAL2Q6UX46 152 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 LINC00336Q6ZUF6 198 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 SH2D6Q7Z4S9 175 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 BAGE2Q86Y30 109 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 NHLRC2Q8NBF2 726 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 SMIM12Q96EX1 92 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 ZNF479Q96JC4 524 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 UPK3BQ9BT76 320 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 VAX2Q9UIW0 290 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
CLN6-209ENST00000569336 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 A0A1B0GVG6 124 aa6.81□□□□□ -1.32
CLN6-209ENST00000569336 A8MWV9 139 aa6.81□□□□□ -1.32
CLN6-209ENST00000569336 CCL20P78556 96 aa6.81□□□□□ -1.32
CLN6-209ENST00000569336 NEGR1Q7Z3B1 354 aa6.81□□□□□ -1.32
CLN6-209ENST00000569336 ZNRF2Q8NHG8 242 aa6.81□□□□□ -1.32
CLN6-209ENST00000569336 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
CLN6-209ENST00000569336 NBDYA0A0U1RRE5 68 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 PGPEP1LA6NFU8 196 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 M0R2N4 97 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 RHODO00212 210 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 RS1O15537 224 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 CXCL1P09341 107 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 MED14OSP0DP75 135 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 MGST1P10620 155 aaKnown RBP6.8□□□□□ -1.32
CLN6-209ENST00000569336 GYPEP15421 78 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 GNG4P50150 75 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 CRIP1P50238 77 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 RHOHQ15669 191 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 PRR27Q6MZM9 219 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 Q6ZR54 194 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 PRADC1Q9BSG0 188 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 MLST8Q9BVC4 326 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 BIN3Q9NQY0 253 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
CLN6-209ENST00000569336 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 K7EQD1 137 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 GATA1P15976 413 aaPredicted RBP6.79□□□□□ -1.32
CLN6-209ENST00000569336 NKX2-5P52952 324 aaPredicted RBP6.79□□□□□ -1.32
CLN6-209ENST00000569336 ESRGQ1W209 222 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 ZFP2Q6ZN57 461 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 ZFP82Q8N141 532 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 DERL1Q9BUN8 251 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 MED9Q9NWA0 146 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 BOLA1Q9Y3E2 137 aa6.79□□□□□ -1.32
CLN6-209ENST00000569336 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 TMSB15BA0A087X1C1 80 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 A0A1W2PPQ1 181 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 GRIFINA4D1Z8 144 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 SLC25A29Q8N8R3 303 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 DAZAP1Q96EP5 407 aaKnown RBP6.78□□□□□ -1.32
CLN6-209ENST00000569336 PARLQ9H300 379 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 Q9H8V8 135 aa6.78□□□□□ -1.32
CLN6-209ENST00000569336 PKD1P98161 4303 aa6.77□□□□□ -1.32
CLN6-209ENST00000569336 XKRY2A2RUG3 117 aa6.77□□□□□ -1.33
CLN6-209ENST00000569336 TMEM250H0YL14 139 aa6.77□□□□□ -1.33
CLN6-209ENST00000569336 M0R381 172 aa6.77□□□□□ -1.33
CLN6-209ENST00000569336 SIVA1O15304 175 aa6.77□□□□□ -1.33
CLN6-209ENST00000569336 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
CLN6-209ENST00000569336 RPS20P60866 119 aaKnown RBP6.77□□□□□ -1.33
CLN6-209ENST00000569336 LYPD6BQ8NI32 183 aa6.77□□□□□ -1.33
CLN6-209ENST00000569336 SCRT2Q9NQ03 307 aa6.77□□□□□ -1.33
CLN6-209ENST00000569336 IGHV3-73A0A0B4J1V6 119 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 RBFOX3A6NFN3 312 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 K7EP13 123 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 NXPH4O95158 308 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 OR5AL1P0C617 328 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 TIRAPP58753 221 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 FAM74A4Q5TZK3 123 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 LYPD5Q6UWN5 251 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 C6orf223Q8N319 242 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 SFRP2Q96HF1 295 aa6.76□□□□□ -1.33
CLN6-209ENST00000569336 TRBV20OR9-2A0A075B6H5 130 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 RAB19A4D1S5 217 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 PRSS29PA6NIE9 313 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 RTL8CO15255 209 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 SNAI2O43623 268 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 P01737 135 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 RPL19P84098 196 aaKnown RBP6.75□□□□□ -1.33
CLN6-209ENST00000569336 DMRTA1Q5VZB9 504 aa6.75□□□□□ -1.33
CLN6-209ENST00000569336 TRAV9-2A0A087WT02 112 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms