RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TRBV6-4A0A1B0GX49 114 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 FBLL1A6NHQ2 334 aaKnown RBP8.17□□□□□ -1.1
SNX29-207ENST00000568949 UBE2L3P68036 154 aaKnown RBP8.17□□□□□ -1.1
SNX29-207ENST00000568949 RHOHQ15669 191 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 GCSAMLQ5JQS6 135 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 Q8N976 141 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 HSD17B11Q8NBQ5 300 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 BAALCQ8WXS3 180 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 SH3BGRL3Q9H299 93 aa8.17□□□□□ -1.1
SNX29-207ENST00000568949 RNF222A6NCQ9 220 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 ARPC5O15511 151 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 GNRH2O43555 120 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 MIR17HGQ75NE6 70 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
SNX29-207ENST00000568949 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 NAGKQ9UJ70 344 aa8.16□□□□□ -1.1
SNX29-207ENST00000568949 IGLV2-11P01706 119 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 CDC34P49427 236 aaPredicted RBP8.15□□□□□ -1.1
SNX29-207ENST00000568949 RPL37AP61513 92 aaKnown RBP8.15□□□□□ -1.1
SNX29-207ENST00000568949 LINC01559Q495D7 138 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 Q5BKY6 102 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 TMED6Q8WW62 240 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 FXYD5Q96DB9 178 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 TMEM167BQ9NRX6 74 aa8.15□□□□□ -1.1
SNX29-207ENST00000568949 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 GGTLC3B5MD39 225 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 CXorf1O96002 111 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 AKR1C8PQ5T2L2 129 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 Q8N3U1 123 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 KCNRGQ8N5I3 272 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 RMI2Q96E14 147 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 PHYHIPLQ96FC7 376 aa8.14□□□□□ -1.11
SNX29-207ENST00000568949 TRAV8-1A0A0A6YYK1 113 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 SERTM2A0A1B0GWG4 89 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 K7EQM0 130 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 PFDN1O60925 122 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 TYMSP04818 313 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 OR10J4P0C629 311 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 RANP62826 216 aaKnown RBP8.13□□□□□ -1.11
SNX29-207ENST00000568949 CFAP126Q5VTH2 177 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 RPL7L1Q6DKI1 246 aaKnown RBP8.13□□□□□ -1.11
SNX29-207ENST00000568949 EIF5AL1Q6IS14 154 aaKnown RBP8.13□□□□□ -1.11
SNX29-207ENST00000568949 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
SNX29-207ENST00000568949 STOML3Q8TAV4 291 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 NKX6-2Q9C056 277 aaPredicted RBP8.13□□□□□ -1.11
SNX29-207ENST00000568949 SDF2L1Q9HCN8 221 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
SNX29-207ENST00000568949 PKHD1L1Q86WI1 4243 aa8.13□□□□□ -1.11
SNX29-207ENST00000568949 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 TRAV21A0A0B4J279 112 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 UMAD1C9J7I0 102 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 DIRC3C9JPN6 131 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 STAG3L2P0CL84 134 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 STAG3L3P0CL85 134 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 HNRNPA3P51991 378 aaKnown RBP8.12□□□□□ -1.11
SNX29-207ENST00000568949 RAB2AP61019 212 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 TCTE3Q8IZS6 198 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 RAB24Q969Q5 203 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 DAZAP1Q96EP5 407 aaKnown RBP8.12□□□□□ -1.11
SNX29-207ENST00000568949 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 OTORQ9NRC9 128 aa8.12□□□□□ -1.11
SNX29-207ENST00000568949 SEC11BP0C7V7 166 aa8.11□□□□□ -1.11
SNX29-207ENST00000568949 MGST1P10620 155 aaKnown RBP8.11□□□□□ -1.11
SNX29-207ENST00000568949 ZNF876PQ49A33 203 aa8.11□□□□□ -1.11
SNX29-207ENST00000568949 Q6ZNX1 250 aa8.11□□□□□ -1.11
SNX29-207ENST00000568949 A0A087WWC5 75 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 IGHV3-73A0A0B4J1V6 119 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 CTXND1A0A1B0GTU2 59 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 G3V3Q6 166 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 BCL2L11O43521 198 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 DPPA3Q6W0C5 159 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 AKAP14Q86UN6 197 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 PTH2Q96A98 100 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 HYLS1Q96M11 299 aa8.1□□□□□ -1.11
SNX29-207ENST00000568949 ZNF471Q9BX82 626 aaPredicted RBP8.1□□□□□ -1.11
SNX29-207ENST00000568949 IGKV2D-24A0A075B6R9 120 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 PGPA6NDG6 321 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 TEX46H3BTG2 121 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 TPT1P13693 172 aaKnown RBP8.09□□□□□ -1.11
SNX29-207ENST00000568949 Q6ZRU5 148 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 SUN5Q8TC36 379 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 NDFIP1Q9BT67 221 aa8.09□□□□□ -1.11
SNX29-207ENST00000568949 LRP2P98164 4655 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 A0A1W2PRE2 83 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 GCHFRP30047 84 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 RAB5CP51148 216 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 LGALSLQ3ZCW2 172 aaPredicted RBP8.08□□□□□ -1.12
SNX29-207ENST00000568949 C14orf177Q52M58 125 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 CYB561D1Q8N8Q1 229 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 C5orf17Q8NAS9 161 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 TCEAL7Q9BRU2 100 aa8.08□□□□□ -1.12
SNX29-207ENST00000568949 CYTL1Q9NRR1 136 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms