RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FAM162BQ5T6X4 162 aa17.35■□□□□ 0.37
FANCA-228ENST00000567943 NHLRC2Q8NBF2 726 aa17.35■□□□□ 0.37
FANCA-228ENST00000567943 Q9H8V8 135 aa17.35■□□□□ 0.37
FANCA-228ENST00000567943 MANBALQ9NQG1 85 aa17.35■□□□□ 0.37
FANCA-228ENST00000567943 PGPEP1LA6NFU8 196 aa17.34■□□□□ 0.37
FANCA-228ENST00000567943 TEX46H3BTG2 121 aa17.34■□□□□ 0.37
FANCA-228ENST00000567943 M0R036 132 aa17.34■□□□□ 0.37
FANCA-228ENST00000567943 S100A9P06702 114 aaKnown RBP17.34■□□□□ 0.37
FANCA-228ENST00000567943 ASIPP42127 132 aa17.34■□□□□ 0.37
FANCA-228ENST00000567943 UPK3BQ9BT76 320 aa17.34■□□□□ 0.37
FANCA-228ENST00000567943 KRTAP1-5Q9BYS1 174 aa17.34■□□□□ 0.37
FANCA-228ENST00000567943 MRPS16Q9Y3D3 137 aaKnown RBP17.34■□□□□ 0.37
FANCA-228ENST00000567943 A0A1B0GVG6 124 aa17.33■□□□□ 0.36
FANCA-228ENST00000567943 MRPL23Q16540 153 aaKnown RBP17.33■□□□□ 0.36
FANCA-228ENST00000567943 ZNF674Q2M3X9 581 aa17.33■□□□□ 0.36
FANCA-228ENST00000567943 ZNF506Q5JVG8 444 aa17.33■□□□□ 0.36
FANCA-228ENST00000567943 KRBOX1C9JBD0 128 aa17.32■□□□□ 0.36
FANCA-228ENST00000567943 RS1O15537 224 aa17.31■□□□□ 0.36
FANCA-228ENST00000567943 GYPEP15421 78 aa17.31■□□□□ 0.36
FANCA-228ENST00000567943 SOHLH1Q5JUK2 328 aa17.31■□□□□ 0.36
FANCA-228ENST00000567943 CFAP126Q5VTH2 177 aa17.31■□□□□ 0.36
FANCA-228ENST00000567943 PCNPQ8WW12 178 aaKnown RBP17.31■□□□□ 0.36
FANCA-228ENST00000567943 PTH2Q96A98 100 aa17.31■□□□□ 0.36
FANCA-228ENST00000567943 GRIFINA4D1Z8 144 aa17.3■□□□□ 0.36
FANCA-228ENST00000567943 K7EQD1 137 aa17.3■□□□□ 0.36
FANCA-228ENST00000567943 BAGE2Q86Y30 109 aa17.3■□□□□ 0.36
FANCA-228ENST00000567943 TMSB15BA0A087X1C1 80 aa17.29■□□□□ 0.36
FANCA-228ENST00000567943 H3BVH4 76 aa17.29■□□□□ 0.36
FANCA-228ENST00000567943 GATA1P15976 413 aaPredicted RBP17.29■□□□□ 0.36
FANCA-228ENST00000567943 SRIP30626 198 aa17.29■□□□□ 0.36
FANCA-228ENST00000567943 NEGR1Q7Z3B1 354 aa17.29■□□□□ 0.36
FANCA-228ENST00000567943 C6orf223Q8N319 242 aa17.29■□□□□ 0.36
FANCA-228ENST00000567943 IL36BQ9NZH7 164 aa17.29■□□□□ 0.36
FANCA-228ENST00000567943 IGHV3-73A0A0B4J1V6 119 aa17.28■□□□□ 0.36
FANCA-228ENST00000567943 LINC01559Q495D7 138 aa17.28■□□□□ 0.36
FANCA-228ENST00000567943 RPL35P42766 123 aaKnown RBP17.27■□□□□ 0.36
FANCA-228ENST00000567943 TNP2Q05952 138 aa17.27■□□□□ 0.36
FANCA-228ENST00000567943 DNLZQ5SXM8 178 aa17.27■□□□□ 0.36
FANCA-228ENST00000567943 LYPD5Q6UWN5 251 aa17.27■□□□□ 0.36
FANCA-228ENST00000567943 C11orf52Q96A22 123 aa17.27■□□□□ 0.36
FANCA-228ENST00000567943 TXNDC17Q9BRA2 123 aa17.27■□□□□ 0.36
FANCA-228ENST00000567943 MLST8Q9BVC4 326 aa17.27■□□□□ 0.36
FANCA-228ENST00000567943 LOC100131303A0A0U1RQF7 123 aa17.26■□□□□ 0.35
FANCA-228ENST00000567943 CIDEAO60543 219 aa17.26■□□□□ 0.35
FANCA-228ENST00000567943 IFNA1P01562 189 aa17.26■□□□□ 0.35
FANCA-228ENST00000567943 ARMS2P0C7Q2 107 aa17.26■□□□□ 0.35
FANCA-228ENST00000567943 DERL1Q9BUN8 251 aa17.26■□□□□ 0.35
FANCA-228ENST00000567943 NKX2-5P52952 324 aaPredicted RBP17.25■□□□□ 0.35
FANCA-228ENST00000567943 ALKAL2Q6UX46 152 aa17.25■□□□□ 0.35
FANCA-228ENST00000567943 ZNF575Q86XF7 245 aa17.25■□□□□ 0.35
FANCA-228ENST00000567943 LRP1BQ9NZR2 4599 aa17.24■□□□□ 0.35
FANCA-228ENST00000567943 NXPH4O95158 308 aa17.24■□□□□ 0.35
FANCA-228ENST00000567943 MEF2BQ02080 365 aaPredicted RBP17.24■□□□□ 0.35
FANCA-228ENST00000567943 TTC32Q5I0X7 151 aa17.24■□□□□ 0.35
FANCA-228ENST00000567943 PIK3CD-AS1Q5SR53 167 aa17.24■□□□□ 0.35
FANCA-228ENST00000567943 SLC25A29Q8N8R3 303 aa17.24■□□□□ 0.35
FANCA-228ENST00000567943 A8MWV9 139 aa17.23■□□□□ 0.35
FANCA-228ENST00000567943 BCL2P10415 239 aa17.23■□□□□ 0.35
FANCA-228ENST00000567943 DMRTA1Q5VZB9 504 aa17.23■□□□□ 0.35
FANCA-228ENST00000567943 PRR27Q6MZM9 219 aa17.23■□□□□ 0.35
FANCA-228ENST00000567943 PARLQ9H300 379 aa17.23■□□□□ 0.35
FANCA-228ENST00000567943 RPL19P84098 196 aaKnown RBP17.22■□□□□ 0.35
FANCA-228ENST00000567943 SYT8Q8NBV8 401 aa17.22■□□□□ 0.35
FANCA-228ENST00000567943 JPT2Q9H910 190 aa17.22■□□□□ 0.35
FANCA-228ENST00000567943 PHLDA3Q9Y5J5 127 aa17.22■□□□□ 0.35
FANCA-228ENST00000567943 TRBV6-4A0A1B0GX49 114 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 SIVA1O15304 175 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 PDE6DO43924 150 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 RHOHQ15669 191 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 CENPWQ5EE01 88 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 PRADC1Q9BSG0 188 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 SCRT2Q9NQ03 307 aa17.21■□□□□ 0.35
FANCA-228ENST00000567943 A0A1W2PPQ1 181 aa17.2■□□□□ 0.34
FANCA-228ENST00000567943 MGST1P10620 155 aaKnown RBP17.2■□□□□ 0.34
FANCA-228ENST00000567943 VAX2Q9UIW0 290 aa17.2■□□□□ 0.34
FANCA-228ENST00000567943 BOLA1Q9Y3E2 137 aa17.2■□□□□ 0.34
FANCA-228ENST00000567943 DNAH5Q8TE73 4624 aa17.2■□□□□ 0.34
FANCA-228ENST00000567943 RYR1P21817 5038 aa17.19■□□□□ 0.34
FANCA-228ENST00000567943 ZFP2Q6ZN57 461 aa17.19■□□□□ 0.34
FANCA-228ENST00000567943 SAMD10Q9BYL1 202 aa17.19■□□□□ 0.34
FANCA-228ENST00000567943 MED9Q9NWA0 146 aa17.19■□□□□ 0.34
FANCA-228ENST00000567943 RAB19A4D1S5 217 aa17.18■□□□□ 0.34
FANCA-228ENST00000567943 M0R381 172 aa17.18■□□□□ 0.34
FANCA-228ENST00000567943 Q6ZSN1 163 aa17.18■□□□□ 0.34
FANCA-228ENST00000567943 SH2D6Q7Z4S9 175 aa17.18■□□□□ 0.34
FANCA-228ENST00000567943 HSPG2P98160 4391 aa17.18■□□□□ 0.34
FANCA-228ENST00000567943 BLOC1S1P78537 153 aa17.17■□□□□ 0.34
FANCA-228ENST00000567943 IGLV2-8P01709 118 aa17.16■□□□□ 0.34
FANCA-228ENST00000567943 TAGLN2P37802 199 aaKnown RBP17.16■□□□□ 0.34
FANCA-228ENST00000567943 GNG4P50150 75 aa17.16■□□□□ 0.34
FANCA-228ENST00000567943 UFSP1Q6NVU6 142 aa17.16■□□□□ 0.34
FANCA-228ENST00000567943 ZFP82Q8N141 532 aa17.16■□□□□ 0.34
FANCA-228ENST00000567943 CXCL1P09341 107 aa17.15■□□□□ 0.34
FANCA-228ENST00000567943 MED14OSP0DP75 135 aa17.15■□□□□ 0.34
FANCA-228ENST00000567943 WFDC10BQ8IUB3 73 aa17.15■□□□□ 0.34
FANCA-228ENST00000567943 SFRP2Q96HF1 295 aa17.15■□□□□ 0.34
FANCA-228ENST00000567943 FAM74A4Q5TZK3 123 aa17.14■□□□□ 0.33
FANCA-228ENST00000567943 A0A087WWL8 130 aa17.13■□□□□ 0.33
FANCA-228ENST00000567943 RHODO00212 210 aa17.13■□□□□ 0.33
FANCA-228ENST00000567943 LINC00315P59091 139 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms