RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 FAM210AQ96ND0 272 aa8.65□□□□□ -1.02
RNF40-211ENST00000567365 MED9Q9NWA0 146 aa8.65□□□□□ -1.02
RNF40-211ENST00000567365 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
RNF40-211ENST00000567365 PGPEP1LA6NFU8 196 aa8.64□□□□□ -1.03
RNF40-211ENST00000567365 C9JCJ5 164 aa8.64□□□□□ -1.03
RNF40-211ENST00000567365 LY6G6CO95867 125 aa8.64□□□□□ -1.03
RNF40-211ENST00000567365 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 RS1O15537 224 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 SFTA3P0C7M3 94 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 ARMS2P0C7Q2 107 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 P0DMU3 169 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 FAM231AP0DMU4 169 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 FAM231CP0DMU5 169 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 ASIPP42127 132 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 CRYBA4P53673 196 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 RPL19P84098 196 aaKnown RBP8.63□□□□□ -1.03
RNF40-211ENST00000567365 OR5I1Q13606 314 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 ZNF876PQ49A33 203 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
RNF40-211ENST00000567365 PCNPQ8WW12 178 aaKnown RBP8.63□□□□□ -1.03
RNF40-211ENST00000567365 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
RNF40-211ENST00000567365 GRIFINA4D1Z8 144 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 H3BVH4 76 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 GNG4P50150 75 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 RNF212Q495C1 297 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 CFAP126Q5VTH2 177 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 PARLQ9H300 379 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
RNF40-211ENST00000567365 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 A0A096LPF7 62 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 A0A0J9YY99 117 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 NXPH4O95158 308 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
RNF40-211ENST00000567365 SLAQ13239 276 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 PRR27Q6MZM9 219 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 UFSP1Q6NVU6 142 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
RNF40-211ENST00000567365 C9JQL5 133 aa8.6□□□□□ -1.03
RNF40-211ENST00000567365 K7EN84 100 aa8.6□□□□□ -1.03
RNF40-211ENST00000567365 SNAI2O43623 268 aa8.6□□□□□ -1.03
RNF40-211ENST00000567365 GATA1P15976 413 aaPredicted RBP8.6□□□□□ -1.03
RNF40-211ENST00000567365 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
RNF40-211ENST00000567365 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
RNF40-211ENST00000567365 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
RNF40-211ENST00000567365 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
RNF40-211ENST00000567365 PAX4O43316 350 aa8.59□□□□□ -1.03
RNF40-211ENST00000567365 CIDEAO60543 219 aa8.59□□□□□ -1.03
RNF40-211ENST00000567365 NUDT3O95989 172 aa8.59□□□□□ -1.03
RNF40-211ENST00000567365 OR5AL1P0C617 328 aa8.59□□□□□ -1.03
RNF40-211ENST00000567365 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
RNF40-211ENST00000567365 EIF5A2Q9GZV4 153 aaKnown RBP8.59□□□□□ -1.03
RNF40-211ENST00000567365 JPT2Q9H910 190 aa8.59□□□□□ -1.03
RNF40-211ENST00000567365 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 A8MWV9 139 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 MGST1P10620 155 aaKnown RBP8.58□□□□□ -1.04
RNF40-211ENST00000567365 FAM3BP58499 235 aaPredicted RBP8.58□□□□□ -1.04
RNF40-211ENST00000567365 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
RNF40-211ENST00000567365 IFITM2Q01629 132 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 ESRGQ1W209 222 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 ZFP2Q6ZN57 461 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 LY96Q9Y6Y9 160 aa8.58□□□□□ -1.04
RNF40-211ENST00000567365 PKD1P98161 4303 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 Q6ZSN1 163 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 NUDT10Q8NFP7 164 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 NUDT11Q96G61 164 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 SFRP2Q96HF1 295 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 BIN3Q9NQY0 253 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 PHLDA3Q9Y5J5 127 aa8.57□□□□□ -1.04
RNF40-211ENST00000567365 HECTD4Q9Y4D8 3996 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 TRBV6-4A0A1B0GX49 114 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 K7EQD1 137 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 CRYGDP07320 174 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 GZMBP10144 247 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 ZFP82Q8N141 532 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 OR2D3Q8NGH3 330 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
RNF40-211ENST00000567365 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 P01737 135 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 RPS20P60866 119 aaKnown RBP8.55□□□□□ -1.04
RNF40-211ENST00000567365 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
RNF40-211ENST00000567365 Q6ZR54 194 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 LINC01551Q86U37 167 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 RNASE7Q9H1E1 156 aaKnown RBP8.55□□□□□ -1.04
RNF40-211ENST00000567365 ICOSQ9Y6W8 199 aa8.55□□□□□ -1.04
RNF40-211ENST00000567365 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 M0R381 172 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 GYPEP15421 78 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms