RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
CLN6-208ENST00000567060 FAM210BQ96KR6 192 aa11.86□□□□□ -0.51
CLN6-208ENST00000567060 KLK5Q9Y337 293 aaPredicted RBP11.86□□□□□ -0.51
CLN6-208ENST00000567060 TRGV1A0A0A0MS02 117 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 LINC00862A6NCI5 91 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 PGPEP1LA6NFU8 196 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 C9JQL5 133 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 M0R036 132 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 DEFB130BP0DP73 79 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 DEFB130AP0DP74 79 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 RNASE3P12724 160 aaKnown RBP11.85□□□□□ -0.51
CLN6-208ENST00000567060 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
CLN6-208ENST00000567060 Q6ZTC4 211 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
CLN6-208ENST00000567060 K7EN84 100 aa11.84□□□□□ -0.51
CLN6-208ENST00000567060 CT83Q5H943 113 aa11.84□□□□□ -0.51
CLN6-208ENST00000567060 Q6ZTI0 123 aa11.84□□□□□ -0.51
CLN6-208ENST00000567060 LINC00476Q8WZB0 136 aa11.84□□□□□ -0.51
CLN6-208ENST00000567060 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
CLN6-208ENST00000567060 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 DEFB131BA0A096LNP1 70 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 GAGE12BA1L429 117 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 GAGE7O76087 117 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 GAGE12FP0CL80 117 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 GAGE12GP0CL81 117 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 GAGE12IP0CL82 117 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 SYT8Q8NBV8 401 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 NUDT10Q8NFP7 164 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 OR2D3Q8NGH3 330 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 SSBP4Q9BWG4 385 aaPredicted RBP11.83□□□□□ -0.52
CLN6-208ENST00000567060 KIAA1109Q2LD37 5005 aa11.83□□□□□ -0.52
CLN6-208ENST00000567060 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
CLN6-208ENST00000567060 SNAI2O43623 268 aa11.82□□□□□ -0.52
CLN6-208ENST00000567060 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
CLN6-208ENST00000567060 ARMS2P0C7Q2 107 aa11.82□□□□□ -0.52
CLN6-208ENST00000567060 PNRC1Q12796 327 aaPredicted RBP11.82□□□□□ -0.52
CLN6-208ENST00000567060 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
CLN6-208ENST00000567060 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
CLN6-208ENST00000567060 PHLDA3Q9Y5J5 127 aa11.82□□□□□ -0.52
CLN6-208ENST00000567060 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 F2Z2F3 143 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 H3BVH4 76 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 ERVFC1-1P60608 527 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
CLN6-208ENST00000567060 SLAQ13239 276 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 ZNF575Q86XF7 245 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 ZFP82Q8N141 532 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 C15orf54Q8N8G6 183 aa11.81□□□□□ -0.52
CLN6-208ENST00000567060 MRPL16Q9NX20 251 aaKnown RBP11.81□□□□□ -0.52
CLN6-208ENST00000567060 MUC4Q99102 2169 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 TMSB15BA0A087X1C1 80 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 GRIFINA4D1Z8 144 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 A8MWL6 223 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 A8MWV9 139 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
CLN6-208ENST00000567060 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
CLN6-208ENST00000567060 COMMD7Q86VX2 200 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 ISOC2Q96AB3 205 aa11.8□□□□□ -0.52
CLN6-208ENST00000567060 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
CLN6-208ENST00000567060 LY6G6CO95867 125 aa11.79□□□□□ -0.52
CLN6-208ENST00000567060 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
CLN6-208ENST00000567060 WDR73Q6P4I2 378 aa11.79□□□□□ -0.52
CLN6-208ENST00000567060 FER1L6-AS1Q8NA97 138 aa11.79□□□□□ -0.52
CLN6-208ENST00000567060 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
CLN6-208ENST00000567060 H3BNG1 76 aa11.78□□□□□ -0.52
CLN6-208ENST00000567060 NXPH4O95158 308 aa11.78□□□□□ -0.52
CLN6-208ENST00000567060 CACNG7P62955 275 aa11.78□□□□□ -0.52
CLN6-208ENST00000567060 ADIRFQ15847 76 aa11.78□□□□□ -0.52
CLN6-208ENST00000567060 SFRP2Q96HF1 295 aa11.78□□□□□ -0.52
CLN6-208ENST00000567060 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
CLN6-208ENST00000567060 TMEM218A2RU14 115 aa11.77□□□□□ -0.53
CLN6-208ENST00000567060 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.53
CLN6-208ENST00000567060 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
CLN6-208ENST00000567060 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
CLN6-208ENST00000567060 OR4C5Q8NGB2 326 aa11.77□□□□□ -0.53
CLN6-208ENST00000567060 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
CLN6-208ENST00000567060 F5H768 121 aa11.76□□□□□ -0.53
CLN6-208ENST00000567060 RHODO00212 210 aa11.76□□□□□ -0.53
CLN6-208ENST00000567060 RS1O15537 224 aa11.76□□□□□ -0.53
CLN6-208ENST00000567060 OR10G8Q8NGN5 311 aa11.76□□□□□ -0.53
CLN6-208ENST00000567060 CNFNQ9BYD5 112 aa11.76□□□□□ -0.53
CLN6-208ENST00000567060 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 PPP1R2P9O14990 202 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 HTN3P15516 51 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 CTRLP40313 264 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 SPANXN1Q5VSR9 72 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
CLN6-208ENST00000567060 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
CLN6-208ENST00000567060 POM121L12Q8N7R1 296 aa11.74□□□□□ -0.53
CLN6-208ENST00000567060 DNAH6Q9C0G6 4158 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 TRGV4A0A0C4DH28 118 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 IGLL5B9A064 214 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 F8W036 122 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 M0R381 172 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 FHL2Q14192 279 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms