RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PTH2Q96A98 100 aa12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 KIAA1109Q2LD37 5005 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 A0A1B0GVY2 172 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 SIVA1O15304 175 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 RS1O15537 224 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 CRIP1P50238 77 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
SYNGR3-204ENST00000564642 hCG_2014768A0A024R1R8 64 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 SCO2A0A1W2PP80 73 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 TEX46H3BTG2 121 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 M0R036 132 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 SH2D1AO60880 128 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 NXPH4O95158 308 aa12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 GATA1P15976 413 aaPredicted RBP12.61□□□□□ -0.39
SYNGR3-204ENST00000564642 KRBOX1C9JBD0 128 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 AKAP14Q86UN6 197 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 IL36BQ9NZH7 164 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
SYNGR3-204ENST00000564642 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
SYNGR3-204ENST00000564642 SULT1A2P50226 295 aa12.59□□□□□ -0.39
SYNGR3-204ENST00000564642 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
SYNGR3-204ENST00000564642 HECTD4Q9Y4D8 3996 aa12.59□□□□□ -0.39
SYNGR3-204ENST00000564642 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 LOC100131303A0A0U1RQF7 123 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 A8MWV9 139 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 H3BVH4 76 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 CCL20P78556 96 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 PIK3CD-AS1Q5SR53 167 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 DNLZQ5SXM8 178 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 BAGE2Q86Y30 109 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 SLC25A29Q8N8R3 303 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 KRTAP1-5Q9BYS1 174 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 DNAH2Q9P225 4427 aa12.58□□□□□ -0.4
SYNGR3-204ENST00000564642 TRBV6-4A0A1B0GX49 114 aa12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 MGST1P10620 155 aaKnown RBP12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 TNP2Q05952 138 aa12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 RHOHQ15669 191 aa12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
SYNGR3-204ENST00000564642 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
SYNGR3-204ENST00000564642 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
SYNGR3-204ENST00000564642 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
SYNGR3-204ENST00000564642 ZFP2Q6ZN57 461 aa12.55□□□□□ -0.4
SYNGR3-204ENST00000564642 PARLQ9H300 379 aa12.55□□□□□ -0.4
SYNGR3-204ENST00000564642 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
SYNGR3-204ENST00000564642 FAT2Q9NYQ8 4349 aa12.54□□□□□ -0.4
SYNGR3-204ENST00000564642 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
SYNGR3-204ENST00000564642 TRAV9-2A0A087WT02 112 aa12.54□□□□□ -0.4
SYNGR3-204ENST00000564642 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
SYNGR3-204ENST00000564642 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
SYNGR3-204ENST00000564642 IFNA1P01562 189 aa12.53□□□□□ -0.4
SYNGR3-204ENST00000564642 RPL35P42766 123 aaKnown RBP12.53□□□□□ -0.4
SYNGR3-204ENST00000564642 JPT2Q9H910 190 aa12.53□□□□□ -0.4
SYNGR3-204ENST00000564642 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
SYNGR3-204ENST00000564642 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
SYNGR3-204ENST00000564642 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
SYNGR3-204ENST00000564642 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
SYNGR3-204ENST00000564642 C11orf52Q96A22 123 aa12.52□□□□□ -0.41
SYNGR3-204ENST00000564642 ABCA13Q86UQ4 5058 aa12.52□□□□□ -0.41
SYNGR3-204ENST00000564642 M0R381 172 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 RHODO00212 210 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 EVI2AP22794 236 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 TIRAPP58753 221 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 LINC00315P59091 139 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 SCRT2Q9NQ03 307 aa12.51□□□□□ -0.41
SYNGR3-204ENST00000564642 PDE6DO43924 150 aa12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 MEF2BQ02080 365 aaPredicted RBP12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 Q6ZSN1 163 aa12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
SYNGR3-204ENST00000564642 TRAV8-6A0A0B4J262 113 aa12.49□□□□□ -0.41
SYNGR3-204ENST00000564642 K7EP13 123 aa12.49□□□□□ -0.41
SYNGR3-204ENST00000564642 MED14OSP0DP75 135 aa12.49□□□□□ -0.41
SYNGR3-204ENST00000564642 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
SYNGR3-204ENST00000564642 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
SYNGR3-204ENST00000564642 CXCL1P09341 107 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 DNAH10OSP0CZ25 163 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 CENPWQ5EE01 88 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 OR10J3Q5JRS4 329 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 GTSF1LQ9H1H1 148 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 VAX2Q9UIW0 290 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
SYNGR3-204ENST00000564642 A0A087WWL8 130 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 IGHV3-38A0A0C4DH36 116 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms