RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 IGHV3-7P01780 117 aa2.57□□□□□ -2
CHD9-212ENST00000564641 IGHMP01871 453 aa2.57□□□□□ -2
CHD9-212ENST00000564641 MT-ATP8P03928 68 aa2.57□□□□□ -2
CHD9-212ENST00000564641 CRYGSP22914 178 aa2.57□□□□□ -2
CHD9-212ENST00000564641 TCTAP57738 103 aa2.57□□□□□ -2
CHD9-212ENST00000564641 GNG3P63215 75 aa2.57□□□□□ -2
CHD9-212ENST00000564641 CATR1Q13166 79 aa2.57□□□□□ -2
CHD9-212ENST00000564641 POU2AF1Q16633 256 aa2.57□□□□□ -2
CHD9-212ENST00000564641 ALKBH6Q3KRA9 238 aa2.57□□□□□ -2
CHD9-212ENST00000564641 C16orf47Q6ZP98 133 aaPredicted RBP2.57□□□□□ -2
CHD9-212ENST00000564641 C2orf91Q6ZV80 131 aa2.57□□□□□ -2
CHD9-212ENST00000564641 GAPTQ8N292 157 aa2.57□□□□□ -2
CHD9-212ENST00000564641 GATSQ8NAP1 163 aa2.57□□□□□ -2
CHD9-212ENST00000564641 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.57□□□□□ -2
CHD9-212ENST00000564641 OR1L1Q8NH94 360 aa2.57□□□□□ -2
CHD9-212ENST00000564641 SRSF12Q8WXF0 261 aaKnown RBP2.57□□□□□ -2
CHD9-212ENST00000564641 PTH2Q96A98 100 aa2.57□□□□□ -2
CHD9-212ENST00000564641 ZNF442Q9H7R0 627 aa2.57□□□□□ -2
CHD9-212ENST00000564641 CCL28Q9NRJ3 127 aa2.57□□□□□ -2
CHD9-212ENST00000564641 VPREB3Q9UKI3 123 aa2.57□□□□□ -2
CHD9-212ENST00000564641 NUP214P35658 2090 aaPredicted RBP2.56□□□□□ -2
CHD9-212ENST00000564641 USF3Q68DE3 2245 aa2.56□□□□□ -2
CHD9-212ENST00000564641 FN1P02751 2386 aaKnown RBP2.56□□□□□ -2
CHD9-212ENST00000564641 VPS13CQ709C8 3753 aa2.56□□□□□ -2
CHD9-212ENST00000564641 TMED7-TICAM2A0A0A6YYA0 188 aa2.56□□□□□ -2
CHD9-212ENST00000564641 IGKV1-9A0A0C4DH69 117 aa2.56□□□□□ -2
CHD9-212ENST00000564641 C17orf51A8MQB3 221 aa2.56□□□□□ -2
CHD9-212ENST00000564641 FABP5P3A8MUU1 101 aa2.56□□□□□ -2
CHD9-212ENST00000564641 IGLL5B9A064 214 aa2.56□□□□□ -2
CHD9-212ENST00000564641 MRPS12O15235 138 aaKnown RBP2.56□□□□□ -2
CHD9-212ENST00000564641 PDCD6O75340 191 aa2.56□□□□□ -2
CHD9-212ENST00000564641 FCN3O75636 299 aa2.56□□□□□ -2
CHD9-212ENST00000564641 APOMO95445 188 aa2.56□□□□□ -2
CHD9-212ENST00000564641 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
CHD9-212ENST00000564641 SLC25A16P16260 332 aa2.56□□□□□ -2
CHD9-212ENST00000564641 CCL1P22362 96 aa2.56□□□□□ -2
CHD9-212ENST00000564641 PRTN3P24158 256 aa2.56□□□□□ -2
CHD9-212ENST00000564641 CFHR2P36980 270 aa2.56□□□□□ -2
CHD9-212ENST00000564641 VDAC2P45880 294 aaPredicted RBP2.56□□□□□ -2
CHD9-212ENST00000564641 DLX1P56177 255 aa2.56□□□□□ -2
CHD9-212ENST00000564641 ZNF121P58317 390 aaPredicted RBP2.56□□□□□ -2
CHD9-212ENST00000564641 SLC35B1P78383 322 aa2.56□□□□□ -2
CHD9-212ENST00000564641 FXYD3Q14802 87 aa2.56□□□□□ -2
CHD9-212ENST00000564641 GUSBP1Q15486 140 aa2.56□□□□□ -2
CHD9-212ENST00000564641 RTL8BQ17RB0 113 aa2.56□□□□□ -2
CHD9-212ENST00000564641 ETDBQ3ZM63 59 aa2.56□□□□□ -2
CHD9-212ENST00000564641 PSMG4Q5JS54 123 aa2.56□□□□□ -2
CHD9-212ENST00000564641 IBA57Q5T440 356 aaKnown RBP2.56□□□□□ -2
CHD9-212ENST00000564641 TMEM42Q69YG0 159 aa2.56□□□□□ -2
CHD9-212ENST00000564641 TMEM14EPQ6UXP3 125 aa2.56□□□□□ -2
CHD9-212ENST00000564641 ZNF818PQ6ZRF7 136 aa2.56□□□□□ -2
CHD9-212ENST00000564641 Q6ZUT4 128 aa2.56□□□□□ -2
CHD9-212ENST00000564641 OSR2Q8N2R0 312 aa2.56□□□□□ -2
CHD9-212ENST00000564641 C6orf223Q8N319 242 aa2.56□□□□□ -2
CHD9-212ENST00000564641 RPRMLQ8N4K4 120 aa2.56□□□□□ -2
CHD9-212ENST00000564641 WFDC11Q8NEX6 87 aa2.56□□□□□ -2
CHD9-212ENST00000564641 ATP6V0E2Q8NHE4 81 aa2.56□□□□□ -2
CHD9-212ENST00000564641 LINC01560Q8TB33 94 aa2.56□□□□□ -2
CHD9-212ENST00000564641 H1FXQ92522 213 aaKnown RBP2.56□□□□□ -2
CHD9-212ENST00000564641 TMEM54Q969K7 222 aa2.56□□□□□ -2
CHD9-212ENST00000564641 C20orf78Q9BR46 151 aa2.56□□□□□ -2
CHD9-212ENST00000564641 NPCDR1Q9BY65 106 aa2.56□□□□□ -2
CHD9-212ENST00000564641 LINC00312Q9Y6C7 94 aa2.56□□□□□ -2
CHD9-212ENST00000564641 HEATR5AQ86XA9 2040 aa2.56□□□□□ -2
CHD9-212ENST00000564641 HEATR1Q9H583 2144 aaKnown RBP2.56□□□□□ -2
CHD9-212ENST00000564641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.56□□□□□ -2
CHD9-212ENST00000564641 ZNF469Q96JG9 3925 aaPredicted RBP2.55□□□□□ -2
CHD9-212ENST00000564641 A0A087WX48 190 aa2.55□□□□□ -2
CHD9-212ENST00000564641 IGHV1-24A0A0C4DH33 117 aa2.55□□□□□ -2
CHD9-212ENST00000564641 A0A1W2PRE2 83 aa2.55□□□□□ -2
CHD9-212ENST00000564641 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
CHD9-212ENST00000564641 CCDC179H3BU77 68 aa2.55□□□□□ -2
CHD9-212ENST00000564641 ZNF688P0C7X2 276 aa2.55□□□□□ -2
CHD9-212ENST00000564641 IFITM1P13164 125 aa2.55□□□□□ -2
CHD9-212ENST00000564641 GCHFRP30047 84 aa2.55□□□□□ -2
CHD9-212ENST00000564641 EDDM3BP56851 147 aa2.55□□□□□ -2
CHD9-212ENST00000564641 LINC00315P59091 139 aa2.55□□□□□ -2
CHD9-212ENST00000564641 RPL31P62899 125 aaKnown RBP2.55□□□□□ -2
CHD9-212ENST00000564641 PSG5Q15238 335 aa2.55□□□□□ -2
CHD9-212ENST00000564641 CENPWQ5EE01 88 aa2.55□□□□□ -2
CHD9-212ENST00000564641 MEIG1Q5JSS6 88 aa2.55□□□□□ -2
CHD9-212ENST00000564641 CASC10Q5T4H9 136 aa2.55□□□□□ -2
CHD9-212ENST00000564641 LINC01545Q5VT33 79 aa2.55□□□□□ -2
CHD9-212ENST00000564641 DGAT2L6Q6ZPD8 337 aa2.55□□□□□ -2
CHD9-212ENST00000564641 LINC00173Q6ZV60 143 aa2.55□□□□□ -2
CHD9-212ENST00000564641 EXPH5Q8NEV8 1989 aa2.55□□□□□ -2
CHD9-212ENST00000564641 LRRC29Q8WV35 223 aa2.55□□□□□ -2
CHD9-212ENST00000564641 ARPC1AQ92747 370 aa2.55□□□□□ -2
CHD9-212ENST00000564641 BORCS8Q96FH0 119 aa2.55□□□□□ -2
CHD9-212ENST00000564641 PRELID3AQ96N28 172 aa2.55□□□□□ -2
CHD9-212ENST00000564641 RNASE7Q9H1E1 156 aaKnown RBP2.55□□□□□ -2
CHD9-212ENST00000564641 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
CHD9-212ENST00000564641 MXRA5Q9NR99 2828 aa2.55□□□□□ -2
CHD9-212ENST00000564641 TMEM167BQ9NRX6 74 aa2.55□□□□□ -2
CHD9-212ENST00000564641 MED29Q9NX70 200 aa2.55□□□□□ -2
CHD9-212ENST00000564641 PLCE1Q9P212 2302 aa2.55□□□□□ -2
CHD9-212ENST00000564641 TP73-AS1Q9UF72 201 aa2.55□□□□□ -2
CHD9-212ENST00000564641 TIMM8BQ9Y5J9 83 aaPredicted RBP2.55□□□□□ -2
CHD9-212ENST00000564641 INSIG2Q9Y5U4 225 aa2.55□□□□□ -2
CHD9-212ENST00000564641 SOX21Q9Y651 276 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms