RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 GPHB5Q86YW7 130 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 CEND1Q8N111 149 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 ZFAND2AQ8N6M9 145 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 RNASE8Q8TDE3 154 aaKnown RBP5.68□□□□□ -1.5
CFDP1-202ENST00000562602 C10orf105Q8TEF2 133 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 TMEM141Q96I45 108 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 TMEM160Q9NX00 188 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 C11orf21Q9P2W6 132 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 TP73-AS1Q9UF72 201 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 BSNQ9UPA5 3926 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 TRBV25-1A0A075B6N4 114 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 OR11H12B2RN74 326 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 H3BUT2 72 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 J3QR89 54 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 GCSHP23434 173 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 UQCRFS1P47985 274 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 HERVK_113P61574 105 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 TM4SF20Q53R12 229 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 OR11H1Q8NG94 326 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 OR11H2Q8NH07 326 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 CCL19Q99731 98 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 VPS25Q9BRG1 176 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 MRPL35Q9NZE8 188 aaKnown RBP5.67□□□□□ -1.5
CFDP1-202ENST00000562602 CHTOPQ9Y3Y2 248 aaKnown RBP5.67□□□□□ -1.5
CFDP1-202ENST00000562602 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
CFDP1-202ENST00000562602 PTPRQQ9UMZ3 2332 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV3OR16-13A0A075B7E8 117 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV3-74A0A0B4J1X5 117 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 TRAV40A0A0B4J280 105 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 B4DSR2 109 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 J3QLI3 93 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 VCYO14598 125 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 DUSP14O95147 198 aaKnown RBP5.66□□□□□ -1.5
CFDP1-202ENST00000562602 MSMBP08118 114 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 PF4V1P10720 104 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 FXYD7P58549 80 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 RPL11P62913 178 aaKnown RBP5.66□□□□□ -1.5
CFDP1-202ENST00000562602 COTL1Q14019 142 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 FAM159AQ6UWV7 190 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 GTSCR1Q86UQ5 136 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 TMEM219Q86XT9 240 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 SYT8Q8NBV8 401 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 NEXN-AS1Q8NBZ9 246 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 RHPN1-AS1Q9BWJ2 59 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 CYSLTR1Q9Y271 337 aa5.66□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV3-49A0A0A0MS15 119 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 KLLNB2CW77 178 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 E9PLD3 99 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 F8W1H4 67 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 H3BUX3 64 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 GATA1P15976 413 aaPredicted RBP5.65□□□□□ -1.5
CFDP1-202ENST00000562602 RNASE4P34096 147 aaKnown RBP5.65□□□□□ -1.5
CFDP1-202ENST00000562602 SNRPD3P62318 126 aaKnown RBP5.65□□□□□ -1.5
CFDP1-202ENST00000562602 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 LYRM7Q5U5X0 104 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 C2orf66Q6UXQ4 117 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 ZNF843Q8N446 348 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 RASL10AQ92737 203 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 HIST1H4GQ99525 98 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 KIR2DL4Q99706 377 aa5.65□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV4-61A0A0C4DH41 118 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 A0A1B0GWB2 263 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 PLA2G2AP14555 144 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 ATP5J2P56134 94 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 CFHR3Q02985 330 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 SCGB2A2Q13296 93 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 RNF151Q2KHN1 245 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 UNQ9165/PRO28630Q6UXU0 137 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 NEGR1Q7Z3B1 354 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 C14orf178Q8N769 122 aaPredicted RBP5.64□□□□□ -1.51
CFDP1-202ENST00000562602 RNF152Q8N8N0 203 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
CFDP1-202ENST00000562602 TLN1Q9Y490 2541 aaKnown RBP5.64□□□□□ -1.51
CFDP1-202ENST00000562602 UBR5O95071 2799 aaPredicted RBP5.63□□□□□ -1.51
CFDP1-202ENST00000562602 ZNF462Q96JM2 2506 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 IGKV2D-26A0A0A0MRZ7 120 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 TRAV26-2A0A0B4J265 109 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 G3V4G9 280 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 LGALS9O00182 355 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 GAS8-AS1O95177 125 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 MGPP08493 103 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 RNASE3P12724 160 aaKnown RBP5.63□□□□□ -1.51
CFDP1-202ENST00000562602 GNLYP22749 145 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 RHOHQ15669 191 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 PRR9Q5T870 116 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 FOXI2Q6ZQN5 318 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 RAB37Q96AX2 223 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 CSTL1Q9H114 145 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 FLNBO75369 2602 aaKnown RBP5.63□□□□□ -1.51
CFDP1-202ENST00000562602 ABCA4P78363 2273 aa5.63□□□□□ -1.51
CFDP1-202ENST00000562602 SPTA1P02549 2419 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 SPENQ96T58 3664 aaKnown RBP5.62□□□□□ -1.51
CFDP1-202ENST00000562602 TRGV11A0A075B6L2 103 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 PRSS29PA6NIE9 313 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 IGLL5B9A064 214 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms