RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SLAQ13239 276 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 FHL2Q14192 279 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 TOR2AQ5JU69 321 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 PIK3CD-AS1Q5SR53 167 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 RYR2Q92736 4967 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 GRIFINA4D1Z8 144 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 C9JCJ5 164 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 OR4C5Q8NGB2 326 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 PRO0255Q9UI72 69 aa11.66□□□□□ -0.54
CLK3-207ENST00000562389 TRGV4A0A0C4DH28 118 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 RS1O15537 224 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 CIDEAO60543 219 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 ARMS2P0C7Q2 107 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 MED14OSP0DP75 135 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
CLK3-207ENST00000562389 CRYBA4P53673 196 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 RNF212Q495C1 297 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 EIF5A2Q9GZV4 153 aaKnown RBP11.65□□□□□ -0.54
CLK3-207ENST00000562389 PARLQ9H300 379 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 SCRT2Q9NQ03 307 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 BIN3Q9NQY0 253 aa11.65□□□□□ -0.54
CLK3-207ENST00000562389 PAX4O43316 350 aa11.64□□□□□ -0.55
CLK3-207ENST00000562389 RPL19P84098 196 aaKnown RBP11.64□□□□□ -0.55
CLK3-207ENST00000562389 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
CLK3-207ENST00000562389 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
CLK3-207ENST00000562389 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
CLK3-207ENST00000562389 HHLA3Q9XRX5 114 aa11.64□□□□□ -0.55
CLK3-207ENST00000562389 HYDINQ4G0P3 5121 aa11.64□□□□□ -0.55
CLK3-207ENST00000562389 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
CLK3-207ENST00000562389 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
CLK3-207ENST00000562389 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
CLK3-207ENST00000562389 KMT2AQ03164 3969 aa11.62□□□□□ -0.55
CLK3-207ENST00000562389 A0A096LPF7 62 aa11.62□□□□□ -0.55
CLK3-207ENST00000562389 A8MWV9 139 aa11.62□□□□□ -0.55
CLK3-207ENST00000562389 FAM3BP58499 235 aaPredicted RBP11.62□□□□□ -0.55
CLK3-207ENST00000562389 PHLDA3Q9Y5J5 127 aa11.62□□□□□ -0.55
CLK3-207ENST00000562389 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
CLK3-207ENST00000562389 SNAI2O43623 268 aa11.61□□□□□ -0.55
CLK3-207ENST00000562389 SRP19P09132 144 aaKnown RBP11.61□□□□□ -0.55
CLK3-207ENST00000562389 GATA1P15976 413 aaPredicted RBP11.61□□□□□ -0.55
CLK3-207ENST00000562389 CCL18P55774 89 aa11.61□□□□□ -0.55
CLK3-207ENST00000562389 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
CLK3-207ENST00000562389 ICOSQ9Y6W8 199 aa11.61□□□□□ -0.55
CLK3-207ENST00000562389 P01737 135 aa11.6□□□□□ -0.55
CLK3-207ENST00000562389 ZFP2Q6ZN57 461 aa11.6□□□□□ -0.55
CLK3-207ENST00000562389 ZFP82Q8N141 532 aa11.6□□□□□ -0.55
CLK3-207ENST00000562389 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
CLK3-207ENST00000562389 SSBP4Q9BWG4 385 aaPredicted RBP11.6□□□□□ -0.55
CLK3-207ENST00000562389 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 K7EN84 100 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 NXPH4O95158 308 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 OR5AL1P0C617 328 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 CEBPGP53567 150 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 RPS20P60866 119 aaKnown RBP11.59□□□□□ -0.55
CLK3-207ENST00000562389 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 LY96Q9Y6Y9 160 aa11.59□□□□□ -0.55
CLK3-207ENST00000562389 K7EQD1 137 aa11.58□□□□□ -0.56
CLK3-207ENST00000562389 M0R381 172 aa11.58□□□□□ -0.56
CLK3-207ENST00000562389 MRPL23Q16540 153 aaKnown RBP11.58□□□□□ -0.56
CLK3-207ENST00000562389 UFSP1Q6NVU6 142 aa11.58□□□□□ -0.56
CLK3-207ENST00000562389 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
CLK3-207ENST00000562389 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
CLK3-207ENST00000562389 JPT2Q9H910 190 aa11.58□□□□□ -0.56
CLK3-207ENST00000562389 IGHV3-73A0A0B4J1V6 119 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 TRBV6-4A0A1B0GX49 114 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 XKRY2A2RUG3 117 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 GYPEP15421 78 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 ESRGQ1W209 222 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
CLK3-207ENST00000562389 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 RHODO00212 210 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 SRIP30626 198 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 PEA15Q15121 130 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 RHOHQ15669 191 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 SAMD10Q9BYL1 202 aa11.56□□□□□ -0.56
CLK3-207ENST00000562389 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
CLK3-207ENST00000562389 GZMBP10144 247 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 FAM231DQ6ZW35 169 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 NEGR1Q7Z3B1 354 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 FER1L6-AS1Q8NA97 138 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 ZNRF2Q8NHG8 242 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 PRADC1Q9BSG0 188 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
CLK3-207ENST00000562389 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
CLK3-207ENST00000562389 MRPS16Q9Y3D3 137 aaKnown RBP11.55□□□□□ -0.56
CLK3-207ENST00000562389 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
CLK3-207ENST00000562389 C9JQL5 133 aa11.54□□□□□ -0.56
CLK3-207ENST00000562389 CRYGDP07320 174 aa11.54□□□□□ -0.56
CLK3-207ENST00000562389 RAB14P61106 215 aa11.54□□□□□ -0.56
CLK3-207ENST00000562389 SRSF3P84103 164 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms