RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 GYPEP15421 78 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 PQLC2Q6ZP29 291 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 MAPKAPK5-AS1Q8N8E1 139 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 TVP23CQ96ET8 276 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 TREM1Q9NP99 234 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 TRAV21A0A0B4J279 112 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 A0A1W2PPQ1 181 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 TMEM218A2RU14 115 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 C9JCJ5 164 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 MRPL23Q16540 153 aaKnown RBP5.64□□□□□ -1.51
GINS3-204ENST00000561952 LYPD5Q6UWN5 251 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 NEGR1Q7Z3B1 354 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 WFDC10BQ8IUB3 73 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 TMEM75Q8N9X5 138 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 OR4C5Q8NGB2 326 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 MBD3L1Q8WWY6 194 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 RAB24Q969Q5 203 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 SPXQ9BT56 116 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 NDFIP1Q9BT67 221 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 SMDT1Q9H4I9 107 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 CARHSP1Q9Y2V2 147 aaKnown RBP5.64□□□□□ -1.51
GINS3-204ENST00000561952 LENEPQ9Y5L5 61 aa5.64□□□□□ -1.51
GINS3-204ENST00000561952 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 TRAV4A0A0B4J268 109 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 M0R2P5 195 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 STAG3L2P0CL84 134 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 STAG3L3P0CL85 134 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 DNAH10OSP0CZ25 163 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 GCHFRP30047 84 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 FHITP49789 147 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 SLAQ13239 276 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 AKR1C8PQ5T2L2 129 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 PRNTQ86SH4 94 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 NHLRC2Q8NBF2 726 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 SEC11CQ9BY50 192 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 SDF2L1Q9HCN8 221 aa5.63□□□□□ -1.51
GINS3-204ENST00000561952 NDUFS6O75380 124 aaKnown RBP5.62□□□□□ -1.51
GINS3-204ENST00000561952 GCGP01275 180 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 TCRAP04437 139 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 PPT1P50897 306 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 ZNF80P51504 273 aaPredicted RBP5.62□□□□□ -1.51
GINS3-204ENST00000561952 UBE2G2P60604 165 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
GINS3-204ENST00000561952 SRSF3P84103 164 aaKnown RBP5.62□□□□□ -1.51
GINS3-204ENST00000561952 Q6ZRN7 208 aaPredicted RBP5.62□□□□□ -1.51
GINS3-204ENST00000561952 C5orf17Q8NAS9 161 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 FAM213BQ8TBF2 198 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 RASL10AQ92737 203 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 PSG8Q9UQ74 426 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 LY96Q9Y6Y9 160 aa5.62□□□□□ -1.51
GINS3-204ENST00000561952 TRAV34A0A0B4J273 112 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 GGTLC3B5MD39 225 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 K7EQM0 130 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 CDK2AP2O75956 126 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 MBP02144 154 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 ORM1P02763 201 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 ADCYAP1P18509 176 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 ERVFC1-1P60608 527 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 FLI1Q01543 452 aaPredicted RBP5.61□□□□□ -1.51
GINS3-204ENST00000561952 PEA15Q15121 130 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 TDRG1Q3Y452 100 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 KCNS1Q96KK3 526 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 TXNDC17Q9BRA2 123 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 ACTR3CQ9C0K3 210 aaPredicted RBP5.61□□□□□ -1.51
GINS3-204ENST00000561952 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
GINS3-204ENST00000561952 TRAV9-2A0A087WT02 112 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 FBLL1A6NHQ2 334 aaKnown RBP5.6□□□□□ -1.51
GINS3-204ENST00000561952 C9JQL5 133 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 EREGO14944 169 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 CXorf1O96002 111 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 APOC3P02656 99 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 CRYGDP07320 174 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 BTF3P20290 206 aaKnown RBP5.6□□□□□ -1.51
GINS3-204ENST00000561952 EVI2AP22794 236 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 FGF8P55075 233 aaPredicted RBP5.6□□□□□ -1.51
GINS3-204ENST00000561952 CCL20P78556 96 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 ZNF726P1Q15940 193 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 ZNF876PQ49A33 203 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 SMUG1Q53HV7 270 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 ZNF506Q5JVG8 444 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 SVBPQ8N300 66 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 CYB561D1Q8N8Q1 229 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 LINC00479Q96M42 142 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 SCRT2Q9NQ03 307 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 TMEM167BQ9NRX6 74 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 EPDR1Q9UM22 224 aa5.6□□□□□ -1.51
GINS3-204ENST00000561952 CTXND1A0A1B0GTU2 59 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 SERTM2A0A1B0GWG4 89 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 RBFOX3A6NFN3 312 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 F8W036 122 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 PFN1P07737 140 aaKnown RBP5.59□□□□□ -1.51
GINS3-204ENST00000561952 GATA1P15976 413 aaPredicted RBP5.59□□□□□ -1.51
GINS3-204ENST00000561952 OR10J3Q5JRS4 329 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 CFAP126Q5VTH2 177 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 ARL6IP6Q8N6S5 226 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 SLC25A29Q8N8R3 303 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 SFT2D1Q8WV19 159 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 Q9HAA7 133 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms