RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
SNX1-211ENST00000560829 Q6ZWC4 215 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 LINC00482Q8N8I6 264 aa9.51□□□□□ -0.89
SNX1-211ENST00000560829 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
SNX1-211ENST00000560829 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
SNX1-211ENST00000560829 CD7P09564 240 aa9.51□□□□□ -0.89
SNX1-211ENST00000560829 C9orf85Q96MD7 179 aa9.51□□□□□ -0.89
SNX1-211ENST00000560829 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
SNX1-211ENST00000560829 OR11H12B2RN74 326 aa9.5□□□□□ -0.89
SNX1-211ENST00000560829 M0R381 172 aa9.5□□□□□ -0.89
SNX1-211ENST00000560829 FAM19A2Q8N3H0 131 aa9.5□□□□□ -0.89
SNX1-211ENST00000560829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.5□□□□□ -0.89
SNX1-211ENST00000560829 TIMM8BQ9Y5J9 83 aaPredicted RBP9.5□□□□□ -0.89
SNX1-211ENST00000560829 NPYP01303 97 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 PF4P02776 101 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 RBMY1A1P0DJD3 496 aaKnown RBP9.49□□□□□ -0.89
SNX1-211ENST00000560829 RBMY1CP0DJD4 496 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 RBMY1FQ15415 496 aaKnown RBP9.49□□□□□ -0.89
SNX1-211ENST00000560829 BEAN1Q3B7T3 259 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 C20orf144Q9BQM9 153 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 SMKR1H3BMG3 65 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 Q8N1Y9 231 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 DEFB125Q8N687 156 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 CITED1Q99966 193 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 LINC00467Q9BRT7 94 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
SNX1-211ENST00000560829 TRGV11A0A075B6L2 103 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 IGHV1-24A0A0C4DH33 117 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 NCR2O95944 276 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 FXYD7P58549 80 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 TRPT1Q86TN4 253 aaKnown RBP9.48□□□□□ -0.89
SNX1-211ENST00000560829 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 PRSS3P2Q8NHM4 247 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 MRAP2Q96G30 205 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
SNX1-211ENST00000560829 FLNBO75369 2602 aaKnown RBP9.47□□□□□ -0.89
SNX1-211ENST00000560829 PRSS47A8MTI9 375 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 SPRY2O43597 315 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 STHQ8IWL8 128 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 SETD2Q9BYW2 2564 aaPredicted RBP9.47□□□□□ -0.89
SNX1-211ENST00000560829 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 TNFRSF6BO95407 300 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
SNX1-211ENST00000560829 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 GSN-AS1Q9NRJ2 163 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 C19orf73Q9NVV2 129 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
SNX1-211ENST00000560829 LINC01546A6NGU7 62 aa9.46□□□□□ -0.9
SNX1-211ENST00000560829 INSP01308 110 aa9.46□□□□□ -0.9
SNX1-211ENST00000560829 NRACQ8N912 160 aa9.46□□□□□ -0.9
SNX1-211ENST00000560829 C2CD3Q4AC94 2353 aa9.46□□□□□ -0.9
SNX1-211ENST00000560829 SCGB1D1O95968 90 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 INSL3P51460 131 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 LINC00315P59091 139 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 S100A12P80511 92 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 C14orf178Q8N769 122 aaPredicted RBP9.45□□□□□ -0.9
SNX1-211ENST00000560829 NXT2Q9NPJ8 142 aaKnown RBP9.45□□□□□ -0.9
SNX1-211ENST00000560829 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 CBY3A6NI87 242 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
SNX1-211ENST00000560829 KRTDAPP60985 99 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 Q8N976 141 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 SYT8Q8NBV8 401 aa9.45□□□□□ -0.9
SNX1-211ENST00000560829 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
SNX1-211ENST00000560829 NUTF2P61970 127 aaKnown RBP9.44□□□□□ -0.9
SNX1-211ENST00000560829 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
SNX1-211ENST00000560829 TRAV26-2A0A0B4J265 109 aa9.43□□□□□ -0.9
SNX1-211ENST00000560829 PTH2Q96A98 100 aa9.43□□□□□ -0.9
SNX1-211ENST00000560829 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 A0A096LNJ9 63 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 Q8N8P6 123 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 PCP4L1A6NKN8 68 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 SMIM17P0DL12 118 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 BTF3P20290 206 aaKnown RBP9.42□□□□□ -0.9
SNX1-211ENST00000560829 C9orf66Q5T8R8 295 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 LINC01587Q99440 93 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 C20orf78Q9BR46 151 aa9.42□□□□□ -0.9
SNX1-211ENST00000560829 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 PPP1R17O96001 155 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 RASL10AQ92737 203 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 JPT2Q9H910 190 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 XCL2Q9UBD3 114 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 HSPB8Q9UJY1 196 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 F8P00451 2351 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 AGRNO00468 2067 aa9.41□□□□□ -0.9
SNX1-211ENST00000560829 MGPP08493 103 aa9.4□□□□□ -0.9
SNX1-211ENST00000560829 ZNF876PQ49A33 203 aa9.4□□□□□ -0.9
SNX1-211ENST00000560829 C11orf72Q8NBR9 251 aa9.4□□□□□ -0.9
SNX1-211ENST00000560829 TMEM70Q9BUB7 260 aa9.4□□□□□ -0.9
SNX1-211ENST00000560829 SORL1Q92673 2214 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms