RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 C20orf144Q9BQM9 153 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 RTBDNQ9BSG5 229 aaPredicted RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 CCDC59Q9P031 241 aaKnown RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 TRAV30A0A087WSZ9 112 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 ANKRD20A5PA0PJZ0 165 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 KMT2DO14686 5537 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 IL4P05112 153 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 SULT1A3P0DMM9 295 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 SULT1A4P0DMN0 295 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 SLC25A4P12235 298 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 OR10J1P30954 320 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 NUP62P37198 522 aaPredicted RBP3.81□□□□□ -1.8
HERC1-208ENST00000560462 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 C2orf83Q53S99 150 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 PRSS54Q6PEW0 395 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 OR51S1Q8NGJ8 323 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 OR1S2Q8NGQ3 325 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 DYNC2LI1Q8TCX1 351 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 RNASEH2CQ8TDP1 164 aaKnown RBP3.81□□□□□ -1.8
HERC1-208ENST00000560462 RAB2BQ8WUD1 216 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 DIRAS2Q96HU8 199 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 PRRT1Q99946 306 aa3.81□□□□□ -1.8
HERC1-208ENST00000560462 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.81□□□□□ -1.8
HERC1-208ENST00000560462 RPL29P47914 159 aaKnown RBP3.8□□□□□ -1.8
HERC1-208ENST00000560462 YPEL3P61236 119 aaPredicted RBP3.8□□□□□ -1.8
HERC1-208ENST00000560462 SUPT4H1P63272 117 aaKnown RBP3.8□□□□□ -1.8
HERC1-208ENST00000560462 NMSQ5H8A3 153 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 UFSP1Q6NVU6 142 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 DTD1Q8TEA8 209 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 ACY3Q96HD9 319 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 DNAJC30Q96LL9 226 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 C2orf50Q96LR7 162 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 RBKSQ9H477 322 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 MCUBQ9NWR8 336 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 SCP2D1Q9UJQ7 156 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 TMEM56-RWDD3S4R434 201 aa3.8□□□□□ -1.8
HERC1-208ENST00000560462 IGHV3-64A0A075B6Q5 118 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 A0A0B4J2A0 478 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 SPINK4O60575 86 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 AKR1C4P17516 323 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 MEOX2P50222 304 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 TMBIM6P55061 237 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 RPL32P62910 135 aaKnown RBP3.79□□□□□ -1.8
HERC1-208ENST00000560462 HIST1H1AQ02539 215 aaPredicted RBP3.79□□□□□ -1.8
HERC1-208ENST00000560462 SMCO1Q147U7 214 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 LYZL2Q7Z4W2 148 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 ZNF680Q8NEM1 530 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 OR51G1Q8NGK1 321 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 MITD1Q8WV92 249 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 PBDC1Q9BVG4 233 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 SLIRPQ9GZT3 109 aaKnown RBP3.79□□□□□ -1.8
HERC1-208ENST00000560462 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 RSL24D1Q9UHA3 163 aaKnown RBP3.79□□□□□ -1.8
HERC1-208ENST00000560462 SHPKQ9UHJ6 478 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 KCNIP3Q9Y2W7 256 aa3.79□□□□□ -1.8
HERC1-208ENST00000560462 MUC21A0A0G2JKD1 596 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 DUXBA0A1W2PPF3 345 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 ZFP92A6NM28 416 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 RD3LP0DJH9 198 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 IAPPP10997 89 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 FAUP35544 74 aaKnown RBP3.78□□□□□ -1.8
HERC1-208ENST00000560462 UBE2D1P51668 147 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 LYZP61626 148 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 IQCF2Q8IXL9 164 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 LGI3Q8N145 548 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 TMEM75Q8N9X5 138 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 C11orf72Q8NBR9 251 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 OR1S1Q8NH92 325 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 MCFD2Q8NI22 146 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 SCGB3A2Q96PL1 93 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 OPRPNQ99935 248 aaPredicted RBP3.78□□□□□ -1.8
HERC1-208ENST00000560462 MRPL16Q9NX20 251 aaKnown RBP3.78□□□□□ -1.8
HERC1-208ENST00000560462 CACFD1Q9UGQ2 172 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 U3KQ87 197 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 V9GYH0 126 aa3.78□□□□□ -1.8
HERC1-208ENST00000560462 IGKV1D-37A0A075B6S9 117 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 PIGBOS1A0A0B4J2F0 54 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 FABP12A6NFH5 140 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 AP3S2P59780 193 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 ZNF90Q03938 601 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 TMEM128Q5BJH2 165 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 C1orf194Q5T5A4 169 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 GFI1BQ5VTD9 330 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 TOMM5Q8N4H5 51 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 ZNF738Q8NE65 137 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 RETNLBQ9BQ08 111 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 SOSTQ9BQB4 213 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 PYGO2Q9BRQ0 406 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 PAIP2BQ9ULR5 123 aaKnown RBP3.77□□□□□ -1.81
HERC1-208ENST00000560462 KLF12Q9Y4X4 402 aa3.77□□□□□ -1.81
HERC1-208ENST00000560462 CCDC160A6NGH7 325 aa3.76□□□□□ -1.81
HERC1-208ENST00000560462 H3BP45 60 aa3.76□□□□□ -1.81
HERC1-208ENST00000560462 FABP1P07148 127 aa3.76□□□□□ -1.81
HERC1-208ENST00000560462 PFN1P07737 140 aaKnown RBP3.76□□□□□ -1.81
HERC1-208ENST00000560462 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
HERC1-208ENST00000560462 SFTA3P0C7M3 94 aa3.76□□□□□ -1.81
HERC1-208ENST00000560462 SEC11BP0C7V7 166 aa3.76□□□□□ -1.81
HERC1-208ENST00000560462 CFC1P0CG37 223 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms