RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
RABGGTA-214ENST00000560163 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-214ENST00000560163 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-214ENST00000560163 FGF7P21781 194 aa12.91□□□□□ -0.34
RABGGTA-214ENST00000560163 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-214ENST00000560163 WDR61Q9GZS3 305 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-214ENST00000560163 OR10J4P0C629 311 aa12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 MT1HL1P0DM35 61 aa12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 TPT1P13693 172 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 RHOHQ15669 191 aa12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 ACOT6Q3I5F7 207 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 DAZAP1Q96EP5 407 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 NPCDR1Q9BY65 106 aa12.9□□□□□ -0.34
RABGGTA-214ENST00000560163 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 TYMSP04818 313 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 ATP6V0E2Q8NHE4 81 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 SCGB1C1Q8TD33 95 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 PAXXQ9BUH6 204 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
RABGGTA-214ENST00000560163 RS1O15537 224 aa12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 CIDEAO60543 219 aa12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 CSN1S1P47710 185 aa12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 DPPA3Q6W0C5 159 aa12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 Q8N976 141 aa12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 PSMG3Q9BT73 122 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-214ENST00000560163 DIRC3C9JPN6 131 aa12.87□□□□□ -0.35
RABGGTA-214ENST00000560163 COX11Q9Y6N1 276 aa12.87□□□□□ -0.35
RABGGTA-214ENST00000560163 IGLV2-11P01706 119 aa12.86□□□□□ -0.35
RABGGTA-214ENST00000560163 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
RABGGTA-214ENST00000560163 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
RABGGTA-214ENST00000560163 EIF5AL1Q6IS14 154 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-214ENST00000560163 KCNIP2Q9NS61 270 aa12.86□□□□□ -0.35
RABGGTA-214ENST00000560163 ZNF876PQ49A33 203 aa12.85□□□□□ -0.35
RABGGTA-214ENST00000560163 TOR2AQ5JU69 321 aa12.85□□□□□ -0.35
RABGGTA-214ENST00000560163 HSD17B11Q8NBQ5 300 aa12.85□□□□□ -0.35
RABGGTA-214ENST00000560163 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
RABGGTA-214ENST00000560163 IGHV3-73A0A0B4J1V6 119 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 C17orf112F2Z3M2 114 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 SERF2P84101 59 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 TEX261Q6UWH6 196 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 TVP23CQ96ET8 276 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 DNAJC30Q96LL9 226 aa12.84□□□□□ -0.35
RABGGTA-214ENST00000560163 GGTLC3B5MD39 225 aa12.83□□□□□ -0.36
RABGGTA-214ENST00000560163 LINC00694P0DN24 101 aa12.83□□□□□ -0.36
RABGGTA-214ENST00000560163 KCNS1Q96KK3 526 aa12.83□□□□□ -0.36
RABGGTA-214ENST00000560163 SDF2L1Q9HCN8 221 aa12.83□□□□□ -0.36
RABGGTA-214ENST00000560163 MGST1P10620 155 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-214ENST00000560163 IFITM2Q01629 132 aa12.82□□□□□ -0.36
RABGGTA-214ENST00000560163 SH3BGRL3Q9H299 93 aa12.82□□□□□ -0.36
RABGGTA-214ENST00000560163 TNXBP22105 4242 aa12.82□□□□□ -0.36
RABGGTA-214ENST00000560163 IFNA7P01567 189 aa12.81□□□□□ -0.36
RABGGTA-214ENST00000560163 UMAD1C9J7I0 102 aa12.8□□□□□ -0.36
RABGGTA-214ENST00000560163 OR7C2O60412 319 aa12.8□□□□□ -0.36
RABGGTA-214ENST00000560163 PTH2Q96A98 100 aa12.8□□□□□ -0.36
RABGGTA-214ENST00000560163 PGPEP1LA6NFU8 196 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 F6UZH7 168 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 MBP02144 154 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 RAB5CP51148 216 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 RMI2Q96E14 147 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 C9orf85Q96MD7 179 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 Q9UF83 564 aa12.79□□□□□ -0.36
RABGGTA-214ENST00000560163 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
RABGGTA-214ENST00000560163 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
RABGGTA-214ENST00000560163 SULT1A2P50226 295 aa12.78□□□□□ -0.36
RABGGTA-214ENST00000560163 UBE2L3P68036 154 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-214ENST00000560163 ALKAL2Q6UX46 152 aa12.78□□□□□ -0.36
RABGGTA-214ENST00000560163 TREM1Q9NP99 234 aa12.78□□□□□ -0.36
RABGGTA-214ENST00000560163 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
RABGGTA-214ENST00000560163 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
RABGGTA-214ENST00000560163 ATRAIDQ6UW56 229 aa12.77□□□□□ -0.37
RABGGTA-214ENST00000560163 CYB561D1Q8N8Q1 229 aa12.77□□□□□ -0.37
RABGGTA-214ENST00000560163 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
RABGGTA-214ENST00000560163 A0A087WWC5 75 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 PGPA6NDG6 321 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 GAGE1Q13065 139 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 GAGE4Q13068 117 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 GAGE5Q13069 117 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 AKR1C8PQ5T2L2 129 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 NIT1Q86X76 327 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
RABGGTA-214ENST00000560163 Q6ZRU5 148 aa12.75□□□□□ -0.37
RABGGTA-214ENST00000560163 GOLT1AQ6ZVE7 132 aa12.75□□□□□ -0.37
RABGGTA-214ENST00000560163 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-214ENST00000560163 ZNF80P51504 273 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-214ENST00000560163 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
RABGGTA-214ENST00000560163 ZFP2Q6ZN57 461 aa12.74□□□□□ -0.37
RABGGTA-214ENST00000560163 LINC00479Q96M42 142 aa12.74□□□□□ -0.37
RABGGTA-214ENST00000560163 KLK12Q9UKR0 248 aa12.74□□□□□ -0.37
RABGGTA-214ENST00000560163 RAB2AP61019 212 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms