RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 H3BVH4 76 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 PDE6DO43924 150 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 ARMS2P0C7Q2 107 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 MEF2BQ02080 365 aaPredicted RBP5.97□□□□□ -1.45
USP3-217ENST00000560070 CENPWQ5EE01 88 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 Q8N3U1 123 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 C15orf53Q8NAA6 179 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 RASL10AQ92737 203 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 EIF5A2Q9GZV4 153 aaKnown RBP5.97□□□□□ -1.45
USP3-217ENST00000560070 JPT2Q9H910 190 aa5.97□□□□□ -1.45
USP3-217ENST00000560070 GNG4P50150 75 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 TOR2AQ5JU69 321 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 ZNF506Q5JVG8 444 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 COX8CQ7Z4L0 72 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 ZNF575Q86XF7 245 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 C11orf52Q96A22 123 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 DAZAP1Q96EP5 407 aaKnown RBP5.96□□□□□ -1.46
USP3-217ENST00000560070 C9orf85Q96MD7 179 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 TXNDC17Q9BRA2 123 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 MLST8Q9BVC4 326 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 PRO0255Q9UI72 69 aa5.96□□□□□ -1.46
USP3-217ENST00000560070 KMT2CQ8NEZ4 4911 aaKnown RBP5.96□□□□□ -1.46
USP3-217ENST00000560070 TRAV4A0A0B4J268 109 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 LOC100131303A0A0U1RQF7 123 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 M0R381 172 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 RS1O15537 224 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 IGLV2-8P01709 118 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 GZMBP10144 247 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 CRYBA4P53673 196 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 CCL18P55774 89 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 SLAQ13239 276 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 ESRGQ1W209 222 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 CFAP126Q5VTH2 177 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 TEX261Q6UWH6 196 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 C18orf15Q96N68 181 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 TPPP3Q9BW30 176 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 LINC00588Q9Y4M8 146 aa5.95□□□□□ -1.46
USP3-217ENST00000560070 GYPEP15421 78 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 TAGLN2P37802 199 aaKnown RBP5.94□□□□□ -1.46
USP3-217ENST00000560070 LINC01559Q495D7 138 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 Q6ZSN1 163 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 OR2D3Q8NGH3 330 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 LYPD6BQ8NI32 183 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 OCC1Q8TAD7 63 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 SAMD10Q9BYL1 202 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 PHLDA3Q9Y5J5 127 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 ICOSQ9Y6W8 199 aa5.94□□□□□ -1.46
USP3-217ENST00000560070 TRBV20OR9-2A0A075B6H5 130 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 A0A087WWL8 130 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 RNF212Q495C1 297 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 SYT8Q8NBV8 401 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 FAM210AQ96ND0 272 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 PARLQ9H300 379 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 IL36BQ9NZH7 164 aa5.93□□□□□ -1.46
USP3-217ENST00000560070 DYNC2H1Q8NCM8 4307 aaKnown RBP5.93□□□□□ -1.46
USP3-217ENST00000560070 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
USP3-217ENST00000560070 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 H3BNG1 76 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 P01737 135 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 GATA1P15976 413 aaPredicted RBP5.92□□□□□ -1.46
USP3-217ENST00000560070 SRSF3P84103 164 aaKnown RBP5.92□□□□□ -1.46
USP3-217ENST00000560070 MRPL23Q16540 153 aaKnown RBP5.92□□□□□ -1.46
USP3-217ENST00000560070 FAM74A4Q5TZK3 123 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 SPANXN1Q5VSR9 72 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 SLC25A29Q8N8R3 303 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 NUDT10Q8NFP7 164 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 PTH2Q96A98 100 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 NUDT11Q96G61 164 aa5.92□□□□□ -1.46
USP3-217ENST00000560070 RNASE7Q9H1E1 156 aaKnown RBP5.92□□□□□ -1.46
USP3-217ENST00000560070 RYR3Q15413 4870 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 C19orf71A6NCJ1 209 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 GAGE12JA6NER3 117 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 A8MWV9 139 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 C9JQL5 133 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 K7EN84 100 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 K7EQD1 137 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 SRP19P09132 144 aaKnown RBP5.91□□□□□ -1.46
USP3-217ENST00000560070 SRIP30626 198 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 GAGE1Q13065 139 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 GAGE4Q13068 117 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 GAGE5Q13069 117 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 GAGE13Q4V321 117 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 DNLZQ5SXM8 178 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 LYPD5Q6UWN5 251 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 NEGR1Q7Z3B1 354 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 ZNRF2Q8NHG8 242 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 PRADC1Q9BSG0 188 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 Q9H8V8 135 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 SCRT2Q9NQ03 307 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 Q9UF83 564 aa5.91□□□□□ -1.46
USP3-217ENST00000560070 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 ZNF727A8MUV8 499 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 TMEM250H0YL14 139 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 CRYGDP07320 174 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 RPS20P60866 119 aaKnown RBP5.9□□□□□ -1.46
USP3-217ENST00000560070 ZFP82Q8N141 532 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms