RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 LGALS1P09382 135 aaKnown RBP8.28□□□□□ -1.08
SPG11-217ENST00000559511 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
SPG11-217ENST00000559511 ID1P41134 155 aa8.28□□□□□ -1.08
SPG11-217ENST00000559511 SYNJ2BPP57105 145 aa8.28□□□□□ -1.08
SPG11-217ENST00000559511 TMEM158Q8WZ71 300 aa8.28□□□□□ -1.08
SPG11-217ENST00000559511 TMEM208Q9BTX3 173 aa8.28□□□□□ -1.08
SPG11-217ENST00000559511 ZNF688P0C7X2 276 aa8.27□□□□□ -1.08
SPG11-217ENST00000559511 DEFB125Q8N687 156 aa8.27□□□□□ -1.08
SPG11-217ENST00000559511 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.08
SPG11-217ENST00000559511 SONP18583 2426 aaKnown RBP8.27□□□□□ -1.09
SPG11-217ENST00000559511 SORL1Q92673 2214 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 CUBNO60494 3623 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 CD5LO43866 347 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 ELANEP08246 267 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 COX8AP10176 69 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 C14orf178Q8N769 122 aaPredicted RBP8.27□□□□□ -1.09
SPG11-217ENST00000559511 MRAP2Q96G30 205 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
SPG11-217ENST00000559511 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 HOXD3P31249 432 aaPredicted RBP8.26□□□□□ -1.09
SPG11-217ENST00000559511 TCTAP57738 103 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 SAMD13Q5VXD3 122 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 Q6ZVH6 145 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 Q8N2B8 174 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 DLEU1O43261 78 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 FGF6P10767 208 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 KRTAP1-1Q07627 177 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 UBE2E2Q96LR5 201 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
SPG11-217ENST00000559511 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 K7EQG2 157 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 LGALS9O00182 355 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 LAGE3Q14657 143 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 C2orf91Q6ZV80 131 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 RNF152Q8N8N0 203 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 RASL10AQ92737 203 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 DPF1Q92782 380 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 FOXC2Q99958 501 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 MYO9AB2RTY4 2548 aa8.25□□□□□ -1.09
SPG11-217ENST00000559511 UNC79Q9P2D8 2635 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 NUDT3O95989 172 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 SMIM17P0DL12 118 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 ODF1Q14990 250 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 DEFB136Q30KP8 78 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 RPL39LQ96EH5 51 aaKnown RBP8.24□□□□□ -1.09
SPG11-217ENST00000559511 NF1P21359 2839 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 A0A0J9YX75 114 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 NXPH4O95158 308 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 NPSP0C0P6 89 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 BVES-AS1Q5T3Y7 98 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 TEX29Q8N6K0 151 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 OR1N2Q8NGR9 330 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
SPG11-217ENST00000559511 ACANP16112 2415 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 TRAV12-2A0A075B6T6 113 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 PRSS1P07477 247 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 MGPP08493 103 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
SPG11-217ENST00000559511 GAGE1Q13065 139 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 FAM159AQ6UWV7 190 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 ADAMTSL5Q6ZMM2 481 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 TMEM86BQ8N661 226 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 AP1S3Q96PC3 154 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 C7orf71A4D174 169 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 SLURP1P55000 103 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
SPG11-217ENST00000559511 ODF3Q96PU9 254 aa8.23□□□□□ -1.09
SPG11-217ENST00000559511 DNAJC9-AS1A6NH13 148 aa8.22□□□□□ -1.09
SPG11-217ENST00000559511 CD7P09564 240 aa8.22□□□□□ -1.09
SPG11-217ENST00000559511 HHLA3Q9XRX5 114 aa8.22□□□□□ -1.09
SPG11-217ENST00000559511 CBY1Q9Y3M2 126 aa8.22□□□□□ -1.09
SPG11-217ENST00000559511 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
SPG11-217ENST00000559511 LINC00315P59091 139 aa8.21□□□□□ -1.09
SPG11-217ENST00000559511 BOD1L2Q8IYS8 172 aa8.21□□□□□ -1.09
SPG11-217ENST00000559511 JPT2Q9H910 190 aa8.21□□□□□ -1.09
SPG11-217ENST00000559511 COX11Q9Y6N1 276 aa8.21□□□□□ -1.09
SPG11-217ENST00000559511 ATP5LO75964 103 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 TCTEX1D4Q5JR98 221 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 C12orf54Q6X4T0 127 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 POM121L12Q8N7R1 296 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 C20orf78Q9BR46 151 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 ESM1Q9NQ30 184 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.1
SPG11-217ENST00000559511 NMUP48645 174 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 Q6ZSV7 163 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 ORAOV1Q8WV07 137 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 IGHV3-16A0A0C4DH30 117 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 IGKCP01834 107 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 CDKN1BP46527 198 aa8.2□□□□□ -1.1
SPG11-217ENST00000559511 MDFICQ9P1T7 246 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms