RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 EIF5AP63241 154 aaKnown RBP7.51□□□□□ -1.21
SPG11-216ENST00000559347 ZNF876PQ49A33 203 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 ZNF506Q5JVG8 444 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 CST9LP1Q5W188 147 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 NEGR1Q7Z3B1 354 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 COX8CQ7Z4L0 72 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 TCTE3Q8IZS6 198 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 SFT2D1Q8WV19 159 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 PCNPQ8WW12 178 aaKnown RBP7.51□□□□□ -1.21
SPG11-216ENST00000559347 TRBV6-1A0A0K0K1D8 114 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 LOC100131303A0A0U1RQF7 123 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 PGPEP1LA6NFU8 196 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 A6NJY4 79 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 SIVA1O15304 175 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 PAGE4O60829 102 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 LTAP01374 205 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 AKR1C3P42330 323 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 TNP2Q05952 138 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 CFAP126Q5VTH2 177 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 LYPD5Q6UWN5 251 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 PTH2Q96A98 100 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 ZFP30Q9Y2G7 519 aa7.5□□□□□ -1.21
SPG11-216ENST00000559347 RS1O15537 224 aa7.49□□□□□ -1.21
SPG11-216ENST00000559347 SH2D1AO60880 128 aa7.49□□□□□ -1.21
SPG11-216ENST00000559347 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
SPG11-216ENST00000559347 ASIPP42127 132 aa7.49□□□□□ -1.21
SPG11-216ENST00000559347 CRIP1P50238 77 aa7.49□□□□□ -1.21
SPG11-216ENST00000559347 Q6ZNX1 250 aa7.49□□□□□ -1.21
SPG11-216ENST00000559347 SCO2A0A1W2PP80 73 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 B4DEV8 164 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 KRBOX1C9JBD0 128 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 H3BVH4 76 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 CIDEAO60543 219 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 C1QBP02746 253 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 S100A4P26447 101 aaKnown RBP7.48□□□□□ -1.21
SPG11-216ENST00000559347 ZNF674Q2M3X9 581 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 LGALSLQ3ZCW2 172 aaPredicted RBP7.48□□□□□ -1.21
SPG11-216ENST00000559347 DNLZQ5SXM8 178 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 FAM162BQ5T6X4 162 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 TXNDC17Q9BRA2 123 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 IL36BQ9NZH7 164 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 DNAH5Q8TE73 4624 aa7.48□□□□□ -1.21
SPG11-216ENST00000559347 RYR1P21817 5038 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 IGHV3-73A0A0B4J1V6 119 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 M0R036 132 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 BTF3P20290 206 aaKnown RBP7.47□□□□□ -1.21
SPG11-216ENST00000559347 LINC00315P59091 139 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 RHOHQ15669 191 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 SLC25A29Q8N8R3 303 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 NHLRC2Q8NBF2 726 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 SVIPQ8NHG7 77 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 PARLQ9H300 379 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
SPG11-216ENST00000559347 TRBV6-4A0A1B0GX49 114 aa7.46□□□□□ -1.22
SPG11-216ENST00000559347 MGST1P10620 155 aaKnown RBP7.46□□□□□ -1.22
SPG11-216ENST00000559347 RAB5CP51148 216 aa7.46□□□□□ -1.22
SPG11-216ENST00000559347 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.22
SPG11-216ENST00000559347 ZNF575Q86XF7 245 aa7.46□□□□□ -1.22
SPG11-216ENST00000559347 MANBALQ9NQG1 85 aa7.46□□□□□ -1.22
SPG11-216ENST00000559347 HSPG2P98160 4391 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 PCLOQ9Y6V0 5065 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 TRAV1-1A0A0B4J248 108 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 A8MWV9 139 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 S100A9P06702 114 aaKnown RBP7.45□□□□□ -1.22
SPG11-216ENST00000559347 ARMS2P0C7Q2 107 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 SULT1A2P50226 295 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 EIF5AL1Q6IS14 154 aaKnown RBP7.45□□□□□ -1.22
SPG11-216ENST00000559347 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 SH2D6Q7Z4S9 175 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 PRADC1Q9BSG0 188 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 MLST8Q9BVC4 326 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 JPT2Q9H910 190 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 LY96Q9Y6Y9 160 aa7.45□□□□□ -1.22
SPG11-216ENST00000559347 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 DNAH10OSP0CZ25 163 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 MED14OSP0DP75 135 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 TIRAPP58753 221 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 CCL20P78556 96 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 AKAP14Q86UN6 197 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 SLC51BQ86UW2 128 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 C11orf52Q96A22 123 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 DERL1Q9BUN8 251 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 SCRT2Q9NQ03 307 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 GNG13Q9P2W3 67 aa7.44□□□□□ -1.22
SPG11-216ENST00000559347 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
SPG11-216ENST00000559347 RPL35P42766 123 aaKnown RBP7.43□□□□□ -1.22
SPG11-216ENST00000559347 RPL19P84098 196 aaKnown RBP7.43□□□□□ -1.22
SPG11-216ENST00000559347 Q6ZSN1 163 aa7.43□□□□□ -1.22
SPG11-216ENST00000559347 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
SPG11-216ENST00000559347 C9orf62Q8N4C0 152 aa7.43□□□□□ -1.22
SPG11-216ENST00000559347 SYT8Q8NBV8 401 aa7.43□□□□□ -1.22
SPG11-216ENST00000559347 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
SPG11-216ENST00000559347 PHLDA3Q9Y5J5 127 aa7.43□□□□□ -1.22
SPG11-216ENST00000559347 TEX46H3BTG2 121 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms