RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 RNASE3P12724 160 aaKnown RBP5.16□□□□□ -1.58
TRAF3-206ENST00000558880 TSPOP30536 169 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 NUTF2P61970 127 aaKnown RBP5.16□□□□□ -1.58
TRAF3-206ENST00000558880 SMUG1Q53HV7 270 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 MUC21Q5SSG8 566 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 OR11H2Q8NH07 326 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 LINC00476Q8WZB0 136 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 ISOC2Q96AB3 205 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 RCHY1Q96PM5 261 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 SMIM7Q9BQ49 75 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 EDA2RQ9HAV5 297 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 LY96Q9Y6Y9 160 aa5.16□□□□□ -1.58
TRAF3-206ENST00000558880 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.58
TRAF3-206ENST00000558880 TRAV21A0A0B4J279 112 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 FABP5P3A8MUU1 101 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 DEFB4AO15263 64 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 MALP21145 153 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 GNG4P50150 75 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 CEBPGP53567 150 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 FAM74A3Q4VXF1 159 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 SOHLH1Q5JUK2 328 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 DNLZQ5SXM8 178 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 FAM231DQ6ZW35 169 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 LINC00612Q8N6U2 182 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 PYGO2Q9BRQ0 406 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 C1QTNF4Q9BXJ3 329 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 RNASE7Q9H1E1 156 aaKnown RBP5.15□□□□□ -1.59
TRAF3-206ENST00000558880 SCRT2Q9NQ03 307 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 CELA1Q9UNI1 258 aa5.15□□□□□ -1.59
TRAF3-206ENST00000558880 CARHSP1Q9Y2V2 147 aaKnown RBP5.15□□□□□ -1.59
TRAF3-206ENST00000558880 IGHV3OR16-12A0A075B7B8 117 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 IGLC6P0CF74 106 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 GZMBP10144 247 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 TMEM241Q24JQ0 296 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 FAM162BQ5T6X4 162 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 TMEM256Q8N2U0 113 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 POM121L12Q8N7R1 296 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 GTSF1Q8WW33 167 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 C9orf85Q96MD7 179 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 LINC01587Q99440 93 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 NDFIP1Q9BT67 221 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 SEC11CQ9BY50 192 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 NAT8Q9UHE5 227 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 GOLT1BQ9Y3E0 138 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 V9GYV3 84 aa5.14□□□□□ -1.59
TRAF3-206ENST00000558880 TRGV11A0A075B6L2 103 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 GRIFINA4D1Z8 144 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 SMIM9A6NGZ8 99 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 M0R036 132 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 MGST1P10620 155 aaKnown RBP5.13□□□□□ -1.59
TRAF3-206ENST00000558880 MIFP14174 115 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 TCL1AP56279 114 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 TMEM263Q8WUH6 116 aaKnown RBP5.13□□□□□ -1.59
TRAF3-206ENST00000558880 NIPSNAP3BQ9BS92 247 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 C1orf43Q9BWL3 253 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 C11orf68Q9H3H3 251 aaKnown RBP5.13□□□□□ -1.59
TRAF3-206ENST00000558880 GSN-AS1Q9NRJ2 163 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 OSTCQ9NRP0 149 aa5.13□□□□□ -1.59
TRAF3-206ENST00000558880 TMSB15BA0A087X1C1 80 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 A0A0J9YWU9 116 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 SNAI2O43623 268 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 SPINK4O60575 86 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 CXCL1P09341 107 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 FOXA3P55318 350 aaPredicted RBP5.12□□□□□ -1.59
TRAF3-206ENST00000558880 DAZ2Q13117 558 aaKnown RBP5.12□□□□□ -1.59
TRAF3-206ENST00000558880 RRN3P1Q2M238 152 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 IBA57Q5T440 356 aaKnown RBP5.12□□□□□ -1.59
TRAF3-206ENST00000558880 ATRAIDQ6UW56 229 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 NAGKQ9UJ70 344 aa5.12□□□□□ -1.59
TRAF3-206ENST00000558880 LYSTQ99698 3801 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 B4DEV8 164 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 F8W036 122 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 NXPH4O95158 308 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 ORM1P02763 201 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 ARMS2P0C7Q2 107 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 HTN1P15515 57 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 LINC00315P59091 139 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 ADIRFQ15847 76 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 C12orf74Q32Q52 190 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 RNF212Q495C1 297 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 UFSP1Q6NVU6 142 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 FAM159AQ6UWV7 190 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 ZNF493Q6ZR52 646 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 Q6ZTI0 123 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 OR2D3Q8NGH3 330 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 OR10AG1Q8NH19 301 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 SFRP2Q96HF1 295 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 CNFNQ9BYD5 112 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 RPP21Q9H633 154 aaKnown RBP5.11□□□□□ -1.59
TRAF3-206ENST00000558880 JPT2Q9H910 190 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 NOP10Q9NPE3 64 aaKnown RBP5.11□□□□□ -1.59
TRAF3-206ENST00000558880 IL36BQ9NZH7 164 aa5.11□□□□□ -1.59
TRAF3-206ENST00000558880 IGHV4-4A0A075B6R2 117 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 SMIM27A0A1W2PRY6 76 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 TMEM189A5PLL7 270 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 CBY3A6NI87 242 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 H3BVH4 76 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 P01737 135 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 OR5AL1P0C617 328 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms