RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NUPR2A6NF83 97 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 C17orf112F2Z3M2 114 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 F6UZH7 168 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 ZNF253O75346 499 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 GPX1P07203 203 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 SFTA3P0C7M3 94 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 CRISP2P16562 243 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 GCHFRP30047 84 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 ZNF138P52744 262 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 TAS2R60P59551 318 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 DAD1P61803 113 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 UBE2L3P68036 154 aaKnown RBP2.92□□□□□ -1.94
SPG11-211ENST00000558561 OR5I1Q13606 314 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 GUK1Q16774 197 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 ESRGQ1W209 222 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 ACOT6Q3I5F7 207 aaPredicted RBP2.92□□□□□ -1.94
SPG11-211ENST00000558561 TMEM41BQ5BJD5 291 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 DPPA3Q6W0C5 159 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 LINC00612Q8N6U2 182 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 SUN5Q8TC36 379 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 VSIG2Q96IQ7 327 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 MRPL32Q9BYC8 188 aaKnown RBP2.92□□□□□ -1.94
SPG11-211ENST00000558561 MRPL16Q9NX20 251 aaKnown RBP2.92□□□□□ -1.94
SPG11-211ENST00000558561 IGHV1OR15-1A0A075B7D0 117 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 A0A096LPF7 62 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 LOC100131303A0A0U1RQF7 123 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 GGTLC3B5MD39 225 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 C11orf94C9JXX5 98 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 H7BYZ3 331 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 RTL8CO15255 209 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 C1QBP02746 253 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 SLC25A5P05141 298 aaKnown RBP2.91□□□□□ -1.94
SPG11-211ENST00000558561 FUSP35637 526 aaKnown RBP eCLIP2.91□□□□□ -1.94
SPG11-211ENST00000558561 CDC34P49427 236 aaPredicted RBP2.91□□□□□ -1.94
SPG11-211ENST00000558561 PDE6HQ13956 83 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 Q6ZRP5 223 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 TMUB2Q71RG4 321 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 PRNTQ86SH4 94 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 KCNRGQ8N5I3 272 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 OR10G8Q8NGN5 311 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 PSMG3Q9BT73 122 aaPredicted RBP2.91□□□□□ -1.94
SPG11-211ENST00000558561 JPT2Q9H910 190 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 OTORQ9NRC9 128 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 EPDR1Q9UM22 224 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 PSG8Q9UQ74 426 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 PRELID1Q9Y255 219 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 LINC00588Q9Y4M8 146 aa2.91□□□□□ -1.94
SPG11-211ENST00000558561 TIMM8BQ9Y5J9 83 aaPredicted RBP2.91□□□□□ -1.94
SPG11-211ENST00000558561 TRAV26-1A0A087WT03 109 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 TRGV1A0A0A0MS02 117 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 IGHV3-73A0A0B4J1V6 119 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 IGKV3D-20A0A0C4DH25 116 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 IGHV3-16A0A0C4DH30 117 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 FAM74A7A6NL05 159 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 LYRM9A8MSI8 78 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 SPINK4O60575 86 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 TCRAP04437 139 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 TYMSP04818 313 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 PET100P0DJ07 73 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 TSPOP30536 169 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 S100A7P31151 101 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 LEPP41159 167 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 ATP5G3P48201 142 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 NKX2-5P52952 324 aaPredicted RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 TMEM183BQ1AE95 376 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 LBHQ53QV2 105 aaPredicted RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 KHDC3LQ587J8 217 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 TMEM78Q5T7P6 136 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 SAMD13Q5VXD3 122 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 IQCF2Q8IXL9 164 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 TMEM183AQ8IXX5 376 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 EIF4E3Q8N5X7 224 aaKnown RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 INO80EQ8NBZ0 244 aaPredicted RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 TMEM263Q8WUH6 116 aaKnown RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 GNPNAT1Q96EK6 184 aaPredicted RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 MRPL53Q96EL3 112 aaKnown RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 NDUFAF3Q9BU61 184 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 ACTR3CQ9C0K3 210 aaPredicted RBP2.9□□□□□ -1.95
SPG11-211ENST00000558561 TREM1Q9NP99 234 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 NAGKQ9UJ70 344 aa2.9□□□□□ -1.95
SPG11-211ENST00000558561 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
SPG11-211ENST00000558561 BORCS7-ASMTA0A0B4J1R7 106 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 MUC21A0A0G2JKD1 596 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 MUC21A0A140T8X8 626 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 CTXND1A0A1B0GTU2 59 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 GRIFINA4D1Z8 144 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 TMEM189A5PLL7 270 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 HMSDA8MTL9 139 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 C9JCJ5 164 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 CXorf1O96002 111 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 GCGP01275 180 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 ATP5G1P05496 136 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 RNASE3P12724 160 aaKnown RBP2.89□□□□□ -1.95
SPG11-211ENST00000558561 CSN1S1P47710 185 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 XGP55808 180 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 TCL1AP56279 114 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 TAS2R45P59539 299 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 SERF2P84101 59 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 DAZ2Q13117 558 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms