RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 H3BVH4 76 aa12.34□□□□□ -0.43
TPM1-214ENST00000558544 LGALS9BQ3B8N2 356 aa12.34□□□□□ -0.43
TPM1-214ENST00000558544 FAM74A3Q4VXF1 159 aa12.34□□□□□ -0.43
TPM1-214ENST00000558544 ZNF575Q86XF7 245 aa12.34□□□□□ -0.43
TPM1-214ENST00000558544 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
TPM1-214ENST00000558544 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
TPM1-214ENST00000558544 M0R2P5 195 aa12.33□□□□□ -0.44
TPM1-214ENST00000558544 ATP5G1P05496 136 aa12.33□□□□□ -0.44
TPM1-214ENST00000558544 LYSTQ99698 3801 aa12.33□□□□□ -0.44
TPM1-214ENST00000558544 SNAPINO95295 136 aa12.32□□□□□ -0.44
TPM1-214ENST00000558544 P01737 135 aa12.32□□□□□ -0.44
TPM1-214ENST00000558544 DNLZQ5SXM8 178 aa12.32□□□□□ -0.44
TPM1-214ENST00000558544 IL36BQ9NZH7 164 aa12.32□□□□□ -0.44
TPM1-214ENST00000558544 NAT8Q9UHE5 227 aa12.32□□□□□ -0.44
TPM1-214ENST00000558544 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
TPM1-214ENST00000558544 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
TPM1-214ENST00000558544 NUDT10Q8NFP7 164 aa12.31□□□□□ -0.44
TPM1-214ENST00000558544 OR2D3Q8NGH3 330 aa12.31□□□□□ -0.44
TPM1-214ENST00000558544 RASL10AQ92737 203 aa12.31□□□□□ -0.44
TPM1-214ENST00000558544 NUDT11Q96G61 164 aa12.31□□□□□ -0.44
TPM1-214ENST00000558544 RNASE7Q9H1E1 156 aaKnown RBP12.31□□□□□ -0.44
TPM1-214ENST00000558544 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
TPM1-214ENST00000558544 IGLL5B9A064 214 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 F5H768 121 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 CXCL1P09341 107 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 TMEM241Q24JQ0 296 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 ZNF876PQ49A33 203 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 LINC01551Q86U37 167 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 C18orf15Q96N68 181 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 GZMBP10144 247 aa12.3□□□□□ -0.44
TPM1-214ENST00000558544 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
TPM1-214ENST00000558544 C7orf77A4D0Y5 90 aa12.29□□□□□ -0.44
TPM1-214ENST00000558544 HOXA5P20719 270 aa12.29□□□□□ -0.44
TPM1-214ENST00000558544 PHLDA3Q9Y5J5 127 aa12.29□□□□□ -0.44
TPM1-214ENST00000558544 IGHV4-4A0A075B6R2 117 aa12.28□□□□□ -0.44
TPM1-214ENST00000558544 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
TPM1-214ENST00000558544 ERVFC1-1P60608 527 aa12.28□□□□□ -0.44
TPM1-214ENST00000558544 RPS20P60866 119 aaKnown RBP12.28□□□□□ -0.44
TPM1-214ENST00000558544 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
TPM1-214ENST00000558544 RHEBQ15382 184 aa12.28□□□□□ -0.44
TPM1-214ENST00000558544 ADIRFQ15847 76 aa12.28□□□□□ -0.44
TPM1-214ENST00000558544 RPP21Q9H633 154 aaKnown RBP12.28□□□□□ -0.44
TPM1-214ENST00000558544 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
TPM1-214ENST00000558544 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
TPM1-214ENST00000558544 TMEM88Q6PEY1 159 aa12.27□□□□□ -0.45
TPM1-214ENST00000558544 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
TPM1-214ENST00000558544 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
TPM1-214ENST00000558544 PTH2Q96A98 100 aa12.27□□□□□ -0.45
TPM1-214ENST00000558544 ZNF479Q96JC4 524 aa12.27□□□□□ -0.45
TPM1-214ENST00000558544 ALMS1Q8TCU4 4167 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 XKRY2A2RUG3 117 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 SNAI2O43623 268 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 GATCO43716 136 aaKnown RBP12.26□□□□□ -0.45
TPM1-214ENST00000558544 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 SYT8Q8NBV8 401 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 ISOC2Q96AB3 205 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 RPS10P5Q9NQ39 176 aa12.26□□□□□ -0.45
TPM1-214ENST00000558544 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 M0R381 172 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 ZFP82Q8N141 532 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 NDUFAF3Q9BU61 184 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 TPPP3Q9BW30 176 aa12.25□□□□□ -0.45
TPM1-214ENST00000558544 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
TPM1-214ENST00000558544 RS1O15537 224 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 FHL2Q14192 279 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 CFAP126Q5VTH2 177 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 CBLN2Q8IUK8 224 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 FAM210BQ96KR6 192 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 JPT2Q9H910 190 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 APLNQ9ULZ1 77 aa12.24□□□□□ -0.45
TPM1-214ENST00000558544 KMT2CQ8NEZ4 4911 aaKnown RBP12.23□□□□□ -0.45
TPM1-214ENST00000558544 TRAV26-1A0A087WT03 109 aa12.23□□□□□ -0.45
TPM1-214ENST00000558544 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
TPM1-214ENST00000558544 A0A0J9YY99 117 aa12.23□□□□□ -0.45
TPM1-214ENST00000558544 SSTP61278 116 aa12.23□□□□□ -0.45
TPM1-214ENST00000558544 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
TPM1-214ENST00000558544 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
TPM1-214ENST00000558544 A0A087WWC5 75 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 IGHV3-73A0A0B4J1V6 119 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 A8MWV9 139 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 TCTAP57738 103 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 RNF212Q495C1 297 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
TPM1-214ENST00000558544 DNAH1Q9P2D7 4330 aa12.21□□□□□ -0.45
TPM1-214ENST00000558544 NXPH4O95158 308 aa12.21□□□□□ -0.45
TPM1-214ENST00000558544 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.45
TPM1-214ENST00000558544 SACSQ9NZJ4 4579 aa12.21□□□□□ -0.45
TPM1-214ENST00000558544 A0A1W2PPQ1 181 aa12.2□□□□□ -0.46
TPM1-214ENST00000558544 CT83Q5H943 113 aa12.2□□□□□ -0.46
TPM1-214ENST00000558544 LYZL1Q6UWQ5 148 aa12.2□□□□□ -0.46
TPM1-214ENST00000558544 GTSF1Q8WW33 167 aa12.2□□□□□ -0.46
TPM1-214ENST00000558544 VSIG2Q96IQ7 327 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms