RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SLC25A22Q9H936 323 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 ICOSQ9Y6W8 199 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
ATXN3-239ENST00000556315 A0A087WWC5 75 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 A0A087WYN8 130 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 B4DEV8 164 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 PSCAO43653 123 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 MED6O75586 246 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 GAS8-AS1O95177 125 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 SFTA3P0C7M3 94 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-239ENST00000556315 MRPL23Q16540 153 aaKnown RBP3.21□□□□□ -1.9
ATXN3-239ENST00000556315 PSG3Q16557 428 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 RPL7L1Q6DKI1 246 aaKnown RBP3.21□□□□□ -1.9
ATXN3-239ENST00000556315 Q6ZTI0 123 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 RNF182Q8N6D2 247 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 Q8N814 137 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 OR10G4Q8NGN3 311 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 TRGV9Q99603 122 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 LINC00467Q9BRT7 94 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 OR5AC2Q9NZP5 309 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 CACNG5Q9UF02 275 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 TMEM56-RWDD3S4R434 201 aa3.21□□□□□ -1.9
ATXN3-239ENST00000556315 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 TRAV5A0A0B4J249 113 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 C5orf52A6NGY3 159 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 CRYGDP07320 174 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 RPL7P18124 248 aaKnown RBP3.2□□□□□ -1.9
ATXN3-239ENST00000556315 ORM2P19652 201 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-239ENST00000556315 S100A10P60903 97 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 ZNF415Q09FC8 603 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 GUK1Q16774 197 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 ZNF876PQ49A33 203 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 Q6ZRG5 221 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 Q6ZSA8 131 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 NEGR1Q7Z3B1 354 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 SELENOHQ8IZQ5 122 aaKnown RBP3.2□□□□□ -1.9
ATXN3-239ENST00000556315 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 PYGO2Q9BRQ0 406 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 TMEM147Q9BVK8 224 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 PARD6GQ9BYG4 376 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-239ENST00000556315 TMEM222Q9H0R3 208 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 GSKIPQ9P0R6 139 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
ATXN3-239ENST00000556315 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 PITX3O75364 302 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 CAMLGP49069 296 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 CRYBA4P53673 196 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 TAS2R30P59541 319 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 RAB11AP62491 216 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 ACOT6Q3I5F7 207 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-239ENST00000556315 TDRG1Q3Y452 100 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 KHDC3LQ587J8 217 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 DTD1Q8TEA8 209 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 RPUSD4Q96CM3 377 aaKnown RBP3.19□□□□□ -1.9
ATXN3-239ENST00000556315 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 MRPL32Q9BYC8 188 aaKnown RBP3.19□□□□□ -1.9
ATXN3-239ENST00000556315 OR51M1Q9H341 326 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 C11orf1Q9H5F2 150 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 GSN-AS1Q9NRJ2 163 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 LYRM2Q9NU23 88 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-239ENST00000556315 FUT9Q9Y231 359 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
ATXN3-239ENST00000556315 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 A0A087X0K7 114 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 IBA57-AS1B1ANH7 110 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 WRBO00258 174 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 RS1O15537 224 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
ATXN3-239ENST00000556315 SPINK4O60575 86 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 SRIP30626 198 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 LEPP41159 167 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 SERF2P84101 59 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 ZNF506Q5JVG8 444 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 TMEM182Q6ZP80 229 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-239ENST00000556315 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 S100A7AQ86SG5 101 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 WFDC10BQ8IUB3 73 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-239ENST00000556315 SHANK2-AS3Q9BTD1 123 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 EIF5A2Q9GZV4 153 aaKnown RBP3.18□□□□□ -1.9
ATXN3-239ENST00000556315 RBKSQ9H477 322 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms