RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 GNRH2O43555 120 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 Q6ZWC4 215 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 M0R2Z0 102 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
VPS33B-205ENST00000556096 PMCHP20382 165 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 CKS2P33552 79 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 SPINK13Q1W4C9 94 aa10.89□□□□□ -0.67
VPS33B-205ENST00000556096 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
VPS33B-205ENST00000556096 FAM19A2Q8N3H0 131 aa10.88□□□□□ -0.67
VPS33B-205ENST00000556096 CLUHP3Q96NS8 147 aa10.88□□□□□ -0.67
VPS33B-205ENST00000556096 LAMTOR2Q9Y2Q5 125 aa10.88□□□□□ -0.67
VPS33B-205ENST00000556096 STAB1Q9NY15 2570 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 PHLDA3Q9Y5J5 127 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 NXPH4O95158 308 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 EVI2AP22794 236 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 CMC4P56277 68 aaPredicted RBP10.87□□□□□ -0.67
VPS33B-205ENST00000556096 OR2K2Q8NGT1 345 aa10.87□□□□□ -0.67
VPS33B-205ENST00000556096 TIMM8BQ9Y5J9 83 aaPredicted RBP10.87□□□□□ -0.67
VPS33B-205ENST00000556096 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
VPS33B-205ENST00000556096 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
VPS33B-205ENST00000556096 SAP30O75446 220 aa10.85□□□□□ -0.67
VPS33B-205ENST00000556096 IGLV1-51P01701 117 aa10.85□□□□□ -0.67
VPS33B-205ENST00000556096 CD7P09564 240 aa10.85□□□□□ -0.67
VPS33B-205ENST00000556096 S100A12P80511 92 aa10.85□□□□□ -0.67
VPS33B-205ENST00000556096 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
VPS33B-205ENST00000556096 C3orf56Q8N813 242 aa10.85□□□□□ -0.67
VPS33B-205ENST00000556096 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 RBMY1BA6NDE4 496 aaKnown RBP10.84□□□□□ -0.67
VPS33B-205ENST00000556096 RBMY1EA6NEQ0 496 aaKnown RBP10.84□□□□□ -0.67
VPS33B-205ENST00000556096 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 M0R381 172 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 CRXO43186 299 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-205ENST00000556096 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 NPYP01303 97 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 RBMY1DP0C7P1 496 aaKnown RBP10.84□□□□□ -0.67
VPS33B-205ENST00000556096 ZNF124Q15973 351 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 FA2HQ7L5A8 372 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 AP5S1Q9NUS5 200 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 IGHV1-24A0A0C4DH33 117 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 PCP4L1A6NKN8 68 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 C9orf85Q96MD7 179 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
VPS33B-205ENST00000556096 ANK2Q01484 3957 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 DNHD1Q96M86 4753 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 OR11H12B2RN74 326 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 NCR2O95944 276 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
VPS33B-205ENST00000556096 MRAP2Q96G30 205 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 DPH3P1Q9H4G8 78 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 AGRNO00468 2067 aa10.83□□□□□ -0.68
VPS33B-205ENST00000556096 TRGV11A0A075B6L2 103 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 PRSS47A8MTI9 375 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 C3orf79P0CE67 100 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 FXYD7P58549 80 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 KRTDAPP60985 99 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 Q8N1Y9 231 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 C20orf144Q9BQM9 153 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
VPS33B-205ENST00000556096 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 SPRY2O43597 315 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 SORL1Q92673 2214 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 GAS8-AS1O95177 125 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 PF4P02776 101 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
VPS33B-205ENST00000556096 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
VPS33B-205ENST00000556096 BEAN1Q3B7T3 259 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 CITED1Q99966 193 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 LINC00467Q9BRT7 94 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 ZNF747Q9BV97 191 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
VPS33B-205ENST00000556096 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
VPS33B-205ENST00000556096 PMCHL1Q16048 86 aa10.8□□□□□ -0.68
VPS33B-205ENST00000556096 STHQ8IWL8 128 aa10.8□□□□□ -0.68
VPS33B-205ENST00000556096 C14orf178Q8N769 122 aaPredicted RBP10.8□□□□□ -0.68
VPS33B-205ENST00000556096 NRACQ8N912 160 aa10.8□□□□□ -0.68
VPS33B-205ENST00000556096 Q8N976 141 aa10.8□□□□□ -0.68
VPS33B-205ENST00000556096 NXT2Q9NPJ8 142 aaKnown RBP10.8□□□□□ -0.68
VPS33B-205ENST00000556096 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
VPS33B-205ENST00000556096 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
VPS33B-205ENST00000556096 SYT8Q8NBV8 401 aa10.79□□□□□ -0.68
VPS33B-205ENST00000556096 CBY3A6NI87 242 aa10.78□□□□□ -0.68
VPS33B-205ENST00000556096 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-205ENST00000556096 BTF3P20290 206 aaKnown RBP10.78□□□□□ -0.68
VPS33B-205ENST00000556096 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
VPS33B-205ENST00000556096 INSP01308 110 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms