RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 LTAP01374 205 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 GYPEP15421 78 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 AKR1C3P42330 323 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 MRPL23Q16540 153 aaKnown RBP14.09□□□□□ -0.15
VTI1B-205ENST00000555543 SOHLH1Q5JUK2 328 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 ZNF506Q5JVG8 444 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 SCO2A0A1W2PP80 73 aa14.08□□□□□ -0.16
VTI1B-205ENST00000555543 SH2D1AO60880 128 aa14.08□□□□□ -0.16
VTI1B-205ENST00000555543 CCL20P78556 96 aa14.08□□□□□ -0.16
VTI1B-205ENST00000555543 CFAP126Q5VTH2 177 aa14.08□□□□□ -0.16
VTI1B-205ENST00000555543 C6orf223Q8N319 242 aa14.08□□□□□ -0.16
VTI1B-205ENST00000555543 LOC100131303A0A0U1RQF7 123 aa14.07□□□□□ -0.16
VTI1B-205ENST00000555543 RS1O15537 224 aa14.07□□□□□ -0.16
VTI1B-205ENST00000555543 GATA1P15976 413 aaPredicted RBP14.07□□□□□ -0.16
VTI1B-205ENST00000555543 NEGR1Q7Z3B1 354 aa14.07□□□□□ -0.16
VTI1B-205ENST00000555543 B4DEV8 164 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 M0R036 132 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 NXPH4O95158 308 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 ORM1P02763 201 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 LYPD5Q6UWN5 251 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 NHLRC2Q8NBF2 726 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 PTH2Q96A98 100 aa14.06□□□□□ -0.16
VTI1B-205ENST00000555543 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 SRIP30626 198 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 ASIPP42127 132 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 RAB14P61106 215 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 ZNF674Q2M3X9 581 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 TTC32Q5I0X7 151 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 CLLU1Q5K131 121 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 FAM162BQ5T6X4 162 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 ZNF575Q86XF7 245 aa14.05□□□□□ -0.16
VTI1B-205ENST00000555543 PCNPQ8WW12 178 aaKnown RBP14.05□□□□□ -0.16
VTI1B-205ENST00000555543 H3BVH4 76 aa14.04□□□□□ -0.16
VTI1B-205ENST00000555543 S100A4P26447 101 aaKnown RBP14.04□□□□□ -0.16
VTI1B-205ENST00000555543 SULT1A2P50226 295 aa14.04□□□□□ -0.16
VTI1B-205ENST00000555543 TNP2Q05952 138 aa14.04□□□□□ -0.16
VTI1B-205ENST00000555543 GNG13Q9P2W3 67 aa14.04□□□□□ -0.16
VTI1B-205ENST00000555543 TRAV1-1A0A0B4J248 108 aa14.03□□□□□ -0.16
VTI1B-205ENST00000555543 GRIFINA4D1Z8 144 aa14.03□□□□□ -0.16
VTI1B-205ENST00000555543 RAB5CP51148 216 aa14.03□□□□□ -0.16
VTI1B-205ENST00000555543 SLC25A29Q8N8R3 303 aa14.03□□□□□ -0.16
VTI1B-205ENST00000555543 IL36BQ9NZH7 164 aa14.03□□□□□ -0.16
VTI1B-205ENST00000555543 A0A1W2PPQ1 181 aa14.02□□□□□ -0.17
VTI1B-205ENST00000555543 SIVA1O15304 175 aa14.02□□□□□ -0.17
VTI1B-205ENST00000555543 LINC01559Q495D7 138 aa14.02□□□□□ -0.17
VTI1B-205ENST00000555543 DNLZQ5SXM8 178 aa14.02□□□□□ -0.17
VTI1B-205ENST00000555543 MANBALQ9NQG1 85 aa14.02□□□□□ -0.17
VTI1B-205ENST00000555543 TMSB15BA0A087X1C1 80 aa14.01□□□□□ -0.17
VTI1B-205ENST00000555543 S100A9P06702 114 aaKnown RBP14.01□□□□□ -0.17
VTI1B-205ENST00000555543 TXNDC17Q9BRA2 123 aa14.01□□□□□ -0.17
VTI1B-205ENST00000555543 MLST8Q9BVC4 326 aa14.01□□□□□ -0.17
VTI1B-205ENST00000555543 PARLQ9H300 379 aa14.01□□□□□ -0.17
VTI1B-205ENST00000555543 JPT2Q9H910 190 aa14.01□□□□□ -0.17
VTI1B-205ENST00000555543 ARMS2P0C7Q2 107 aa14□□□□□ -0.17
VTI1B-205ENST00000555543 DERL1Q9BUN8 251 aa14□□□□□ -0.17
VTI1B-205ENST00000555543 TRBV6-4A0A1B0GX49 114 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 CIDEAO60543 219 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 PIK3CD-AS1Q5SR53 167 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 DMRTA1Q5VZB9 504 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 Q6ZSN1 163 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 BAGE2Q86Y30 109 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 WFDC10BQ8IUB3 73 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 C11orf52Q96A22 123 aa13.99□□□□□ -0.17
VTI1B-205ENST00000555543 RPL35P42766 123 aaKnown RBP13.98□□□□□ -0.17
VTI1B-205ENST00000555543 BLOC1S1P78537 153 aa13.98□□□□□ -0.17
VTI1B-205ENST00000555543 RHOHQ15669 191 aa13.98□□□□□ -0.17
VTI1B-205ENST00000555543 NDUFA5Q16718 116 aa13.98□□□□□ -0.17
VTI1B-205ENST00000555543 SAMD10Q9BYL1 202 aa13.98□□□□□ -0.17
VTI1B-205ENST00000555543 SCRT2Q9NQ03 307 aa13.98□□□□□ -0.17
VTI1B-205ENST00000555543 A8MWV9 139 aa13.97□□□□□ -0.17
VTI1B-205ENST00000555543 MGST1P10620 155 aaKnown RBP13.97□□□□□ -0.17
VTI1B-205ENST00000555543 LINC00315P59091 139 aa13.97□□□□□ -0.17
VTI1B-205ENST00000555543 RPL19P84098 196 aaKnown RBP13.97□□□□□ -0.17
VTI1B-205ENST00000555543 UFSP1Q6NVU6 142 aa13.97□□□□□ -0.17
VTI1B-205ENST00000555543 LINC00862A6NCI5 91 aa13.96□□□□□ -0.17
VTI1B-205ENST00000555543 ZFP2Q6ZN57 461 aa13.96□□□□□ -0.17
VTI1B-205ENST00000555543 PRADC1Q9BSG0 188 aa13.96□□□□□ -0.17
VTI1B-205ENST00000555543 TEX46H3BTG2 121 aa13.95□□□□□ -0.18
VTI1B-205ENST00000555543 PRR27Q6MZM9 219 aa13.95□□□□□ -0.18
VTI1B-205ENST00000555543 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
VTI1B-205ENST00000555543 M0R381 172 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 RYR1P21817 5038 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 TIRAPP58753 221 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 Q6ZRN7 208 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-205ENST00000555543 SYT8Q8NBV8 401 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 MED9Q9NWA0 146 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 Q9UF83 564 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 PHLDA3Q9Y5J5 127 aa13.94□□□□□ -0.18
VTI1B-205ENST00000555543 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
VTI1B-205ENST00000555543 MEF2BQ02080 365 aaPredicted RBP13.93□□□□□ -0.18
VTI1B-205ENST00000555543 CENPWQ5EE01 88 aa13.93□□□□□ -0.18
VTI1B-205ENST00000555543 TNFRSF18Q9Y5U5 241 aa13.93□□□□□ -0.18
VTI1B-205ENST00000555543 LY96Q9Y6Y9 160 aa13.93□□□□□ -0.18
VTI1B-205ENST00000555543 IGLV2-8P01709 118 aa13.92□□□□□ -0.18
VTI1B-205ENST00000555543 LINC00694P0DN24 101 aa13.92□□□□□ -0.18
VTI1B-205ENST00000555543 BCL2P10415 239 aa13.92□□□□□ -0.18
VTI1B-205ENST00000555543 C14orf178Q8N769 122 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-205ENST00000555543 SFRP2Q96HF1 295 aa13.92□□□□□ -0.18
VTI1B-205ENST00000555543 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms