RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZNF674Q2M3X9 581 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 LINC00588Q9Y4M8 146 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 TMSB15BA0A087X1C1 80 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 A0A096LPF7 62 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 KRBOX1C9JBD0 128 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
SRP54-206ENST00000555317 SRIP30626 198 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 SOHLH1Q5JUK2 328 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 C11orf52Q96A22 123 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 MED9Q9NWA0 146 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 VAX2Q9UIW0 290 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 PHLDA3Q9Y5J5 127 aa8.41□□□□□ -1.06
SRP54-206ENST00000555317 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 CIDEAO60543 219 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
SRP54-206ENST00000555317 GYPEP15421 78 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 GNG4P50150 75 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 CRIP1P50238 77 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 CENPWQ5EE01 88 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 PTH2Q96A98 100 aa8.4□□□□□ -1.06
SRP54-206ENST00000555317 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 PGPEP1LA6NFU8 196 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 A8MWV9 139 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 RS1O15537 224 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 ESRGQ1W209 222 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 NEGR1Q7Z3B1 354 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 DAZAP1Q96EP5 407 aaKnown RBP8.39□□□□□ -1.07
SRP54-206ENST00000555317 PRADC1Q9BSG0 188 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
SRP54-206ENST00000555317 MRPS16Q9Y3D3 137 aaKnown RBP8.39□□□□□ -1.07
SRP54-206ENST00000555317 FRAS1Q86XX4 4008 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 K7EQD1 137 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 ARMS2P0C7Q2 107 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 GATA1P15976 413 aaPredicted RBP8.38□□□□□ -1.07
SRP54-206ENST00000555317 RHOHQ15669 191 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 TTC32Q5I0X7 151 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 DNLZQ5SXM8 178 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 SH2D6Q7Z4S9 175 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 MLST8Q9BVC4 326 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 Q9H8V8 135 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 BIN3Q9NQY0 253 aa8.38□□□□□ -1.07
SRP54-206ENST00000555317 M0R381 172 aa8.37□□□□□ -1.07
SRP54-206ENST00000555317 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
SRP54-206ENST00000555317 LINC00336Q6ZUF6 198 aa8.37□□□□□ -1.07
SRP54-206ENST00000555317 SMIM12Q96EX1 92 aa8.37□□□□□ -1.07
SRP54-206ENST00000555317 UPK3BQ9BT76 320 aa8.37□□□□□ -1.07
SRP54-206ENST00000555317 RAB19A4D1S5 217 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 RBFOX3A6NFN3 312 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 RHODO00212 210 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
SRP54-206ENST00000555317 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 ZFP2Q6ZN57 461 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 Q6ZR54 194 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 PARLQ9H300 379 aa8.36□□□□□ -1.07
SRP54-206ENST00000555317 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 TRBV6-4A0A1B0GX49 114 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 XKRY2A2RUG3 117 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 NXPH4O95158 308 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 CXCL1P09341 107 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 MED14OSP0DP75 135 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 RPS20P60866 119 aaKnown RBP8.35□□□□□ -1.07
SRP54-206ENST00000555317 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 SLC25A29Q8N8R3 303 aa8.35□□□□□ -1.07
SRP54-206ENST00000555317 EIF5A2Q9GZV4 153 aaKnown RBP8.35□□□□□ -1.07
SRP54-206ENST00000555317 EPPK1P58107 5090 aaKnown RBP8.35□□□□□ -1.07
SRP54-206ENST00000555317 LOC100131303A0A0U1RQF7 123 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 SIVA1O15304 175 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 P01737 135 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 CEBPGP53567 150 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 SPANXN1Q5VSR9 72 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 TPPP3Q9BW30 176 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
SRP54-206ENST00000555317 A0A087WWL8 130 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 A0A1W2PPQ1 181 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 PRSS29PA6NIE9 313 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 TMEM250H0YL14 139 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 TOR2AQ5JU69 321 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 LYPD6BQ8NI32 183 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 SFRP2Q96HF1 295 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 JPT2Q9H910 190 aa8.33□□□□□ -1.08
SRP54-206ENST00000555317 HECTD4Q9Y4D8 3996 aa8.32□□□□□ -1.08
SRP54-206ENST00000555317 IGLV2-8P01709 118 aa8.32□□□□□ -1.08
SRP54-206ENST00000555317 OR5AL1P0C617 328 aa8.32□□□□□ -1.08
SRP54-206ENST00000555317 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
SRP54-206ENST00000555317 TRBV20OR9-2A0A075B6H5 130 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 TRAV9-2A0A087WT02 112 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 RTL8CO15255 209 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 234.9 ms