RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ARL3P36405 182 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 ERCC8Q13216 396 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 BATFQ16520 125 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 GLMPQ8WWB7 406 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 DLX4Q92988 240 aaPredicted RBP13.05□□□□□ -0.32
SHOX-204ENST00000554971 DLEU1O43261 78 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
SHOX-204ENST00000554971 HBDP02042 147 aa13.04□□□□□ -0.32
SHOX-204ENST00000554971 SLC25A34Q6PIV7 304 aa13.04□□□□□ -0.32
SHOX-204ENST00000554971 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
SHOX-204ENST00000554971 FBN3Q75N90 2809 aa13.04□□□□□ -0.32
SHOX-204ENST00000554971 IGHV4-4A0A075B6R2 117 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 LGALS9BQ3B8N2 356 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 LGALS9CQ6DKI2 356 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 LINC00477Q96M19 166 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 NXT2Q9NPJ8 142 aaKnown RBP13.03□□□□□ -0.32
SHOX-204ENST00000554971 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 MAP1LC3AQ9H492 121 aa13.03□□□□□ -0.32
SHOX-204ENST00000554971 OVOL1O14753 267 aa13.02□□□□□ -0.32
SHOX-204ENST00000554971 CACNG7P62955 275 aa13.02□□□□□ -0.32
SHOX-204ENST00000554971 SMIM15Q7Z3B0 74 aa13.02□□□□□ -0.32
SHOX-204ENST00000554971 DEFB125Q8N687 156 aa13.02□□□□□ -0.32
SHOX-204ENST00000554971 RNF185Q96GF1 192 aa13.02□□□□□ -0.32
SHOX-204ENST00000554971 SCRT2Q9NQ03 307 aa13.02□□□□□ -0.32
SHOX-204ENST00000554971 PRKDCP78527 4128 aaKnown RBP13.02□□□□□ -0.33
SHOX-204ENST00000554971 A0A096LNJ9 63 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 TRBV7-9A0A0J9YWB2 115 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 PRB4P10163 310 aaPredicted RBP13.01□□□□□ -0.33
SHOX-204ENST00000554971 SYNJ2BPP57105 145 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 STPG4Q8N801 248 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 IGHV3-66A0A0C4DH42 116 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 PRSS47A8MTI9 375 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 UNQ9165/PRO28630Q6UXU0 137 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 ORAOV1Q8WV07 137 aa13.01□□□□□ -0.33
SHOX-204ENST00000554971 LOC389332A0A1B0GUA5 103 aa13□□□□□ -0.33
SHOX-204ENST00000554971 hDV102S1A0JD36 115 aa13□□□□□ -0.33
SHOX-204ENST00000554971 NPYP01303 97 aa13□□□□□ -0.33
SHOX-204ENST00000554971 SNAI2O43623 268 aa13□□□□□ -0.33
SHOX-204ENST00000554971 EDN2P20800 178 aa13□□□□□ -0.33
SHOX-204ENST00000554971 G0S2P27469 103 aa13□□□□□ -0.33
SHOX-204ENST00000554971 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
SHOX-204ENST00000554971 GPHB5Q86YW7 130 aa13□□□□□ -0.33
SHOX-204ENST00000554971 GOLT1BQ9Y3E0 138 aa13□□□□□ -0.33
SHOX-204ENST00000554971 ZNF207O43670 478 aaKnown RBP12.98□□□□□ -0.33
SHOX-204ENST00000554971 COX8AP10176 69 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 IGHV3OR16-13A0A075B7E8 117 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 IGHV3-74A0A0B4J1X5 117 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 HINT1P49773 126 aaPredicted RBP12.98□□□□□ -0.33
SHOX-204ENST00000554971 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 OR9G4Q8NGQ1 327 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
SHOX-204ENST00000554971 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 K7EMT4 169 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 SOCS3O14543 225 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 TNFRSF6BO95407 300 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 FCER1GP30273 86 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 ZNF124Q15973 351 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 OXLD1Q5BKU9 147 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 MUC21Q5SSG8 566 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 ZNF738Q8NE65 137 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 MSRB1Q9NZV6 116 aa12.97□□□□□ -0.33
SHOX-204ENST00000554971 IGHV3-49A0A0A0MS15 119 aa12.96□□□□□ -0.33
SHOX-204ENST00000554971 MED14OSP0DP75 135 aa12.96□□□□□ -0.33
SHOX-204ENST00000554971 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
SHOX-204ENST00000554971 IGHV7-4-1A0A0J9YVY3 117 aa12.96□□□□□ -0.34
SHOX-204ENST00000554971 LGALS9O00182 355 aa12.96□□□□□ -0.34
SHOX-204ENST00000554971 TFPI2P48307 235 aa12.96□□□□□ -0.34
SHOX-204ENST00000554971 Q8N8P6 123 aa12.96□□□□□ -0.34
SHOX-204ENST00000554971 OR8A1Q8NGG7 326 aa12.96□□□□□ -0.34
SHOX-204ENST00000554971 TIMM8BQ9Y5J9 83 aaPredicted RBP12.96□□□□□ -0.34
SHOX-204ENST00000554971 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
SHOX-204ENST00000554971 G3V4G9 280 aa12.95□□□□□ -0.34
SHOX-204ENST00000554971 TM4SF20Q53R12 229 aa12.95□□□□□ -0.34
SHOX-204ENST00000554971 H0Y8G0 127 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 SMKR1H3BMG3 65 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 MRAP2Q96G30 205 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 NCR2O95944 276 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 OR2K2Q8NGT1 345 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
SHOX-204ENST00000554971 SMPXQ9UHP9 88 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
SHOX-204ENST00000554971 SAMD5Q5TGI4 173 aa12.93□□□□□ -0.34
SHOX-204ENST00000554971 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
SHOX-204ENST00000554971 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
SHOX-204ENST00000554971 SIVA1O15304 175 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 WIPF1O43516 503 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 SPANXN1Q5VSR9 72 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 ZFAND2AQ8N6M9 145 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 SAP30O75446 220 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 NUDT3O95989 172 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 BVES-AS1Q5T3Y7 98 aa12.92□□□□□ -0.34
SHOX-204ENST00000554971 LEPP41159 167 aa12.91□□□□□ -0.34
SHOX-204ENST00000554971 MPV17L2Q567V2 206 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms