RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 DEFB125Q8N687 156 aa8.53□□□□□ -1.04
VPS33B-204ENST00000554660 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
VPS33B-204ENST00000554660 DNAH10Q8IVF4 4471 aa8.52□□□□□ -1.04
VPS33B-204ENST00000554660 KMT2AQ03164 3969 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 TRAV8-1A0A0A6YYK1 113 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 IGHV3-21A0A0B4J1V1 117 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 A0A0G2JLM5 398 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 OR10AG1Q8NH19 301 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 MRPL53Q96EL3 112 aaKnown RBP8.52□□□□□ -1.05
VPS33B-204ENST00000554660 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 CLEC5AQ9NY25 188 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 PEF1Q9UBV8 284 aaKnown RBP8.52□□□□□ -1.05
VPS33B-204ENST00000554660 RABAC1Q9UI14 185 aa8.52□□□□□ -1.05
VPS33B-204ENST00000554660 TMEM189A5PLL7 270 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 H3BUA1 57 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 PPBPP02775 128 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 APELAP0DMC3 54 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 CD300EQ496F6 205 aaPredicted RBP8.51□□□□□ -1.05
VPS33B-204ENST00000554660 SGK494Q96LW2 274 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 SLC50A1Q9BRV3 221 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 SIGLEC8Q9NYZ4 499 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
VPS33B-204ENST00000554660 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 H3BTX0 84 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 EDN2P20800 178 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 CRIP1P50238 77 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 SLC25A34Q6PIV7 304 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 FA2HQ7L5A8 372 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 ZNF738Q8NE65 137 aa8.5□□□□□ -1.05
VPS33B-204ENST00000554660 IGLC6P0CF74 106 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 G0S2P27469 103 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 STPG4Q8N801 248 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 OR2K2Q8NGT1 345 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 DYNLRB2Q8TF09 96 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 C17orf77Q96MU5 243 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 SCRT2Q9NQ03 307 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 RYR1P21817 5038 aa8.49□□□□□ -1.05
VPS33B-204ENST00000554660 OR11H12B2RN74 326 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 SH2D1AO60880 128 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 CTSGP08311 255 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 BATFQ16520 125 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 COX11Q9Y6N1 276 aa8.48□□□□□ -1.05
VPS33B-204ENST00000554660 HIST1H1AQ02539 215 aaPredicted RBP8.47□□□□□ -1.05
VPS33B-204ENST00000554660 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
VPS33B-204ENST00000554660 FER1L6-AS1Q8NA97 138 aa8.47□□□□□ -1.05
VPS33B-204ENST00000554660 TRBV7-1A0A0A6YYK4 115 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 M0R3E3 92 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 COX8AP10176 69 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
VPS33B-204ENST00000554660 LYZL1Q6UWQ5 148 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 OVOL2Q9BRP0 275 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 LENEPQ9Y5L5 61 aa8.46□□□□□ -1.06
VPS33B-204ENST00000554660 A0A0J9YWU9 116 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 SIVA1O15304 175 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 HBDP02042 147 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 NPSP0C0P6 89 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 RHOGP84095 191 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 UBE2V1Q13404 147 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 DEFB114Q30KQ6 69 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 C8orf49Q96NF6 230 aa8.45□□□□□ -1.06
VPS33B-204ENST00000554660 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
VPS33B-204ENST00000554660 BUB3O43684 328 aa8.44□□□□□ -1.06
VPS33B-204ENST00000554660 HINT1P49773 126 aaPredicted RBP8.44□□□□□ -1.06
VPS33B-204ENST00000554660 SEC11AP67812 179 aa8.44□□□□□ -1.06
VPS33B-204ENST00000554660 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
VPS33B-204ENST00000554660 EEF1AKMT3Q96AZ1 226 aa8.44□□□□□ -1.06
VPS33B-204ENST00000554660 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
VPS33B-204ENST00000554660 U3KQE9 123 aa8.44□□□□□ -1.06
VPS33B-204ENST00000554660 VPS13DQ5THJ4 4388 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 IGHV4-4A0A075B6R2 117 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 A0A096LNJ9 63 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 FAM223BA6NKX1 122 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 D6R8Y8 96 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 TFPI2P48307 235 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 CEMP1Q6PRD7 247 aaPredicted RBP8.43□□□□□ -1.06
VPS33B-204ENST00000554660 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 FAM223AQ8IWN6 122 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 TMEM61Q8N0U2 210 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 MAP1LC3AQ9H492 121 aa8.43□□□□□ -1.06
VPS33B-204ENST00000554660 IGKV2-40A0A087WW87 121 aaPredicted RBP8.42□□□□□ -1.06
VPS33B-204ENST00000554660 OR2T8A6NH00 312 aa8.42□□□□□ -1.06
VPS33B-204ENST00000554660 K7EP13 123 aa8.42□□□□□ -1.06
VPS33B-204ENST00000554660 IGKV2D-40P01614 121 aaPredicted RBP8.42□□□□□ -1.06
VPS33B-204ENST00000554660 ATP5G2Q06055 141 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms