RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TYMSP04818 313 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 FGF7P21781 194 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 BTCP35070 178 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 RPL37AP61513 92 aaKnown RBP4.71□□□□□ -1.66
ATXN3-219ENST00000553488 BAXQ07812 192 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 RHOHQ15669 191 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 FAM159AQ6UWV7 190 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 MIR17HGQ75NE6 70 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 DAZ4Q86SG3 579 aaKnown RBP4.71□□□□□ -1.66
ATXN3-219ENST00000553488 MITD1Q8WV92 249 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 DNAJC30Q96LL9 226 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 NPCDR1Q9BY65 106 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 MRPS26Q9BYN8 205 aaKnown RBP4.71□□□□□ -1.66
ATXN3-219ENST00000553488 GTSF1LQ9H1H1 148 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 DAZ3Q9NR90 486 aaKnown RBP4.71□□□□□ -1.66
ATXN3-219ENST00000553488 GSKIPQ9P0R6 139 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 LENEPQ9Y5L5 61 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 IGSF23A1L1A6 192 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 RBFOX3A6NFN3 312 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 H3BMQ9 156 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 L7N2F9 121 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 GNRH2O43555 120 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 OR10J4P0C629 311 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 NBEAP1P0C6P0 100 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 SULT1A1P50225 295 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 TMBIM6P55061 237 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 ACOT6Q3I5F7 207 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-219ENST00000553488 C10orf25Q5T742 122 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 CFAP126Q5VTH2 177 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 ATP6V0E2Q8NHE4 81 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 TMED6Q8WW62 240 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 C20orf85Q9H1P6 137 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 GPN1Q9HCN4 374 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-219ENST00000553488 LYRM2Q9NU23 88 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-219ENST00000553488 NAGKQ9UJ70 344 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 LSM5Q9Y4Y9 91 aaKnown RBP4.7□□□□□ -1.66
ATXN3-219ENST00000553488 LPAP08519 4548 aa4.7□□□□□ -1.66
ATXN3-219ENST00000553488 C5orf51A6NDU8 294 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 BCAP31P51572 246 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 CNPY1Q3B7I2 92 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 Q8N976 141 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 PAXXQ9BUH6 204 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 OR51M1Q9H341 326 aa4.69□□□□□ -1.66
ATXN3-219ENST00000553488 IGHV3-73A0A0B4J1V6 119 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 NAP1L6A6NFF2 107 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 GGTLC3B5MD39 225 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 USP17L23D6RBM5 183 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 F6UZH7 168 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 CIDEAO60543 219 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 S100A11P31949 105 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 IL15RAQ13261 267 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 TWIST1Q15672 202 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 TVP23CQ96ET8 276 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 C9orf85Q96MD7 179 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 RPH3ALQ9UNE2 315 aa4.68□□□□□ -1.66
ATXN3-219ENST00000553488 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 TRAV21A0A0B4J279 112 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 MGST1P10620 155 aaKnown RBP4.67□□□□□ -1.66
ATXN3-219ENST00000553488 CSN1S1P47710 185 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 INPP1P49441 399 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 RANP62826 216 aaKnown RBP4.67□□□□□ -1.66
ATXN3-219ENST00000553488 UBE2L3P68036 154 aaKnown RBP4.67□□□□□ -1.66
ATXN3-219ENST00000553488 HBG1P69891 147 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 HBG2P69892 147 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 ZNF876PQ49A33 203 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 ZNF506Q5JVG8 444 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 STX12Q86Y82 276 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 THAP6Q8TBB0 222 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 RMI2Q96E14 147 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 SDHCQ99643 169 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-219ENST00000553488 SDF2L1Q9HCN8 221 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 Q9UF83 564 aa4.67□□□□□ -1.66
ATXN3-219ENST00000553488 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 TRAV8-1A0A0A6YYK1 113 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 GAGE12JA6NER3 117 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 PANO1I0J062 215 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 OR7C2O60412 319 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 GAGE1Q13065 139 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 GAGE4Q13068 117 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 GAGE5Q13069 117 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 ATP6V1FQ16864 119 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 SPANXN2Q5MJ10 180 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 UFSP1Q6NVU6 142 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 Q6ZRU5 148 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 NIT1Q86X76 327 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 CYB561D1Q8N8Q1 229 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 ASB13Q8WXK3 278 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 PTH2Q96A98 100 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 KCNS1Q96KK3 526 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 LINC00479Q96M42 142 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 ATP5SQ99766 215 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 PARLQ9H300 379 aa4.66□□□□□ -1.66
ATXN3-219ENST00000553488 FAM25EA8MYX2 175 aa4.65□□□□□ -1.67
ATXN3-219ENST00000553488 RNASE3P12724 160 aaKnown RBP4.65□□□□□ -1.67
ATXN3-219ENST00000553488 PVALBP20472 110 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms