RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 C15orf53Q8NAA6 179 aa11.41□□□□□ -0.58
GCN1-209ENST00000551920 IL36BQ9NZH7 164 aa11.41□□□□□ -0.58
GCN1-209ENST00000551920 TRAV4A0A0B4J268 109 aa11.4□□□□□ -0.58
GCN1-209ENST00000551920 TMEM250H0YL14 139 aa11.4□□□□□ -0.58
GCN1-209ENST00000551920 PARLQ9H300 379 aa11.4□□□□□ -0.58
GCN1-209ENST00000551920 NUDT3O95989 172 aa11.39□□□□□ -0.59
GCN1-209ENST00000551920 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
GCN1-209ENST00000551920 MGST1P10620 155 aaKnown RBP11.39□□□□□ -0.59
GCN1-209ENST00000551920 S100A4P26447 101 aaKnown RBP11.39□□□□□ -0.59
GCN1-209ENST00000551920 PTH2Q96A98 100 aa11.39□□□□□ -0.59
GCN1-209ENST00000551920 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
GCN1-209ENST00000551920 SCRT2Q9NQ03 307 aa11.39□□□□□ -0.59
GCN1-209ENST00000551920 C19orf71A6NCJ1 209 aa11.38□□□□□ -0.59
GCN1-209ENST00000551920 K7EN84 100 aa11.38□□□□□ -0.59
GCN1-209ENST00000551920 CFAP126Q5VTH2 177 aa11.38□□□□□ -0.59
GCN1-209ENST00000551920 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
GCN1-209ENST00000551920 H3BNG1 76 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 P0DMU3 169 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 CRYBA4P53673 196 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 OR4C5Q8NGB2 326 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 PRO0255Q9UI72 69 aa11.37□□□□□ -0.59
GCN1-209ENST00000551920 A0A096LPF7 62 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 TRGV4A0A0C4DH28 118 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 C9JQL5 133 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 RS1O15537 224 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 SRP19P09132 144 aaKnown RBP11.36□□□□□ -0.59
GCN1-209ENST00000551920 CXCL1P09341 107 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 CEBPGP53567 150 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
GCN1-209ENST00000551920 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 JPT2Q9H910 190 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 HHLA3Q9XRX5 114 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
GCN1-209ENST00000551920 PAX4O43316 350 aa11.35□□□□□ -0.59
GCN1-209ENST00000551920 NDUFS6O75380 124 aaKnown RBP11.35□□□□□ -0.59
GCN1-209ENST00000551920 OCC1Q8TAD7 63 aa11.35□□□□□ -0.59
GCN1-209ENST00000551920 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 NXPH4O95158 308 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 GZMBP10144 247 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 GATA1P15976 413 aaPredicted RBP11.34□□□□□ -0.59
GCN1-209ENST00000551920 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 UFSP1Q6NVU6 142 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
GCN1-209ENST00000551920 M0R381 172 aa11.33□□□□□ -0.6
GCN1-209ENST00000551920 SNAI2O43623 268 aa11.33□□□□□ -0.6
GCN1-209ENST00000551920 IFITM2Q01629 132 aa11.33□□□□□ -0.6
GCN1-209ENST00000551920 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
GCN1-209ENST00000551920 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
GCN1-209ENST00000551920 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
GCN1-209ENST00000551920 PHLDA3Q9Y5J5 127 aa11.33□□□□□ -0.6
GCN1-209ENST00000551920 MUC21A0A0G2JKD1 596 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 LOC100131303A0A0U1RQF7 123 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 MUC21A0A140T8X8 626 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 P01737 135 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 SLAQ13239 276 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 RNF212Q495C1 297 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 Q6ZSN1 163 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 SMIM7Q9BQ49 75 aa11.32□□□□□ -0.6
GCN1-209ENST00000551920 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
GCN1-209ENST00000551920 A8MWV9 139 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 ESRGQ1W209 222 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 ZFP82Q8N141 532 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 SLC25A29Q8N8R3 303 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 NUDT10Q8NFP7 164 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
GCN1-209ENST00000551920 NUDT11Q96G61 164 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 ICOSQ9Y6W8 199 aa11.31□□□□□ -0.6
GCN1-209ENST00000551920 K7EQD1 137 aa11.3□□□□□ -0.6
GCN1-209ENST00000551920 GYPEP15421 78 aa11.3□□□□□ -0.6
GCN1-209ENST00000551920 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
GCN1-209ENST00000551920 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
GCN1-209ENST00000551920 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
GCN1-209ENST00000551920 A0A087WWL8 130 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 ZNF727A8MUV8 499 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 CRYGDP07320 174 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
GCN1-209ENST00000551920 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 DNAH2Q9P225 4427 aa11.29□□□□□ -0.6
GCN1-209ENST00000551920 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 CIDEAO60543 219 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 CCL18P55774 89 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
GCN1-209ENST00000551920 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 Q9UF83 564 aa11.28□□□□□ -0.6
GCN1-209ENST00000551920 IGLV2-18A0A075B6J9 118 aa11.27□□□□□ -0.61
GCN1-209ENST00000551920 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
GCN1-209ENST00000551920 PEA15Q15121 130 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms