RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 TIRAPP58753 221 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 SUMO1P63165 101 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 WFDC2Q14508 124 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 SAPCD1Q5SSQ6 148 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 RPL7L1Q6DKI1 246 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 SH2D6Q7Z4S9 175 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 Q8N3U1 123 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 Q8N814 137 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 SLC25A29Q8N8R3 303 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 SH3BGRL3Q9H299 93 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 PSG8Q9UQ74 426 aa11.93□□□□□ -0.5
PRPF40B-215ENST00000551418 DNAH8Q96JB1 4490 aa11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 PFN1P07737 140 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 ZNF80P51504 273 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 FLI1Q01543 452 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 SMUG1Q53HV7 270 aa11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 Q5BKY6 102 aa11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 TMEM70Q9BUB7 260 aa11.92□□□□□ -0.5
PRPF40B-215ENST00000551418 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
PRPF40B-215ENST00000551418 Q6ZSN1 163 aa11.91□□□□□ -0.5
PRPF40B-215ENST00000551418 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 RS1O15537 224 aa11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 GCGP01275 180 aa11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 ZNF876PQ49A33 203 aa11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
PRPF40B-215ENST00000551418 PGPEP1LA6NFU8 196 aa11.89□□□□□ -0.51
PRPF40B-215ENST00000551418 PRNTQ86SH4 94 aa11.89□□□□□ -0.51
PRPF40B-215ENST00000551418 TRAV8-6A0A0B4J262 113 aa11.88□□□□□ -0.51
PRPF40B-215ENST00000551418 IFNA7P01567 189 aa11.88□□□□□ -0.51
PRPF40B-215ENST00000551418 HIST1H2BAQ96A08 127 aa11.88□□□□□ -0.51
PRPF40B-215ENST00000551418 Q9UF83 564 aa11.88□□□□□ -0.51
PRPF40B-215ENST00000551418 ARPC5O15511 151 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 LELP1Q5T871 98 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 STOML3Q8TAV4 291 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 PTH2Q96A98 100 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 C9orf85Q96MD7 179 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 TCEAL7Q9BRU2 100 aa11.87□□□□□ -0.51
PRPF40B-215ENST00000551418 TRBV6-4A0A1B0GX49 114 aa11.86□□□□□ -0.51
PRPF40B-215ENST00000551418 LECT2O14960 151 aa11.86□□□□□ -0.51
PRPF40B-215ENST00000551418 ZNF506Q5JVG8 444 aa11.86□□□□□ -0.51
PRPF40B-215ENST00000551418 PRADC1Q9BSG0 188 aa11.86□□□□□ -0.51
PRPF40B-215ENST00000551418 PEX7O00628 323 aa11.85□□□□□ -0.51
PRPF40B-215ENST00000551418 RHOHQ15669 191 aa11.85□□□□□ -0.51
PRPF40B-215ENST00000551418 ZNF726P1Q15940 193 aa11.85□□□□□ -0.51
PRPF40B-215ENST00000551418 PIK3CD-AS1Q5SR53 167 aa11.85□□□□□ -0.51
PRPF40B-215ENST00000551418 ATP6V0E2Q8NHE4 81 aa11.85□□□□□ -0.51
PRPF40B-215ENST00000551418 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
PRPF40B-215ENST00000551418 MAP1LC3B2A6NCE7 125 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 UBE2G2P60604 165 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 ZNF345Q14585 488 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
PRPF40B-215ENST00000551418 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 G3V3Q6 166 aa11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 J3QL48 77 aa11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 MGST1P10620 155 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 DAZ4Q86SG3 579 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 DAZ3Q9NR90 486 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
PRPF40B-215ENST00000551418 GAGE12JA6NER3 117 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 FHITP49789 147 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 GAGE1Q13065 139 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 GAGE4Q13068 117 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 GAGE5Q13069 117 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 GAGE13Q4V321 117 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 Q6ZSA8 131 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 Q86TA4 180 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 FMC1Q96HJ9 113 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 DNAJC30Q96LL9 226 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 JPT2Q9H910 190 aa11.82□□□□□ -0.52
PRPF40B-215ENST00000551418 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-215ENST00000551418 TRAV34A0A0B4J273 112 aa11.81□□□□□ -0.52
PRPF40B-215ENST00000551418 A8MWV9 139 aa11.81□□□□□ -0.52
PRPF40B-215ENST00000551418 ASIPP42127 132 aa11.81□□□□□ -0.52
PRPF40B-215ENST00000551418 UBE2G1P62253 170 aa11.81□□□□□ -0.52
PRPF40B-215ENST00000551418 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
PRPF40B-215ENST00000551418 HMSDA8MTL9 139 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 UMAD1C9J7I0 102 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 C1QBP02746 253 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 LAGE3Q14657 143 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 KCNRGQ8N5I3 272 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 LINC00479Q96M42 142 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 SAMD10Q9BYL1 202 aa11.8□□□□□ -0.52
PRPF40B-215ENST00000551418 PARLQ9H300 379 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms