RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PMCHP20382 165 aa14.52□□□□□ -0.08
SSH1-209ENST00000551165 RAB4AP20338 218 aa14.52□□□□□ -0.09
SSH1-209ENST00000551165 RNASEKQ6P5S7 137 aaKnown RBP14.52□□□□□ -0.09
SSH1-209ENST00000551165 SAMD10Q9BYL1 202 aa14.52□□□□□ -0.09
SSH1-209ENST00000551165 A8MTW9 85 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 CD7P09564 240 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 IGLV1-51P01701 117 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 PRM2P04554 102 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 TSPOP30536 169 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 Q6ZWC4 215 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 SCRT2Q9NQ03 307 aa14.51□□□□□ -0.09
SSH1-209ENST00000551165 IGHV4-4A0A075B6R2 117 aa14.5□□□□□ -0.09
SSH1-209ENST00000551165 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
SSH1-209ENST00000551165 DMRTA1Q5VZB9 504 aa14.5□□□□□ -0.09
SSH1-209ENST00000551165 MDFICQ9P1T7 246 aa14.5□□□□□ -0.09
SSH1-209ENST00000551165 U3KQK5 164 aa14.5□□□□□ -0.09
SSH1-209ENST00000551165 PF4P02776 101 aa14.49□□□□□ -0.09
SSH1-209ENST00000551165 AMTP48728 403 aa14.49□□□□□ -0.09
SSH1-209ENST00000551165 LINC00482Q8N8I6 264 aa14.49□□□□□ -0.09
SSH1-209ENST00000551165 GATA1P15976 413 aaPredicted RBP14.49□□□□□ -0.09
SSH1-209ENST00000551165 WFDC10AQ9H1F0 79 aa14.49□□□□□ -0.09
SSH1-209ENST00000551165 NIT2Q9NQR4 276 aa14.49□□□□□ -0.09
SSH1-209ENST00000551165 PHLDA3Q9Y5J5 127 aa14.49□□□□□ -0.09
SSH1-209ENST00000551165 Q8N1Y9 231 aa14.48□□□□□ -0.09
SSH1-209ENST00000551165 PRELID3AQ96N28 172 aa14.48□□□□□ -0.09
SSH1-209ENST00000551165 TDRG1Q3Y452 100 aa14.48□□□□□ -0.09
SSH1-209ENST00000551165 LOC389332A0A1B0GUA5 103 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 NPYP01303 97 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 CKS2P33552 79 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 CACNG7P62955 275 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 ORMDL3Q8N138 153 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 TRAV26-2A0A0B4J265 109 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 DNLZQ5SXM8 178 aa14.47□□□□□ -0.09
SSH1-209ENST00000551165 IGHV1OR15-1A0A075B7D0 117 aa14.46□□□□□ -0.09
SSH1-209ENST00000551165 IGHV3-16A0A0C4DH30 117 aa14.46□□□□□ -0.09
SSH1-209ENST00000551165 OR11H12B2RN74 326 aa14.46□□□□□ -0.09
SSH1-209ENST00000551165 HSBP1O75506 76 aa14.46□□□□□ -0.09
SSH1-209ENST00000551165 HTN1P15515 57 aa14.46□□□□□ -0.09
SSH1-209ENST00000551165 LINC00614P0C842 121 aa14.46□□□□□ -0.1
SSH1-209ENST00000551165 JOSD1Q15040 202 aaPredicted RBP14.46□□□□□ -0.1
SSH1-209ENST00000551165 ZMAT5Q9UDW3 170 aaKnown RBP14.46□□□□□ -0.1
SSH1-209ENST00000551165 NOTCH3Q9UM47 2321 aa14.45□□□□□ -0.1
SSH1-209ENST00000551165 IFI27P40305 119 aaPredicted RBP14.45□□□□□ -0.1
SSH1-209ENST00000551165 C14orf178Q8N769 122 aaPredicted RBP14.45□□□□□ -0.1
SSH1-209ENST00000551165 JPT2Q9H910 190 aa14.45□□□□□ -0.1
SSH1-209ENST00000551165 TRRAPQ9Y4A5 3859 aa14.45□□□□□ -0.1
SSH1-209ENST00000551165 MED14OSP0DP75 135 aa14.45□□□□□ -0.1
SSH1-209ENST00000551165 PCP4L1A6NKN8 68 aa14.44□□□□□ -0.1
SSH1-209ENST00000551165 CITED1Q99966 193 aa14.44□□□□□ -0.1
SSH1-209ENST00000551165 C19orf73Q9NVV2 129 aa14.43□□□□□ -0.1
SSH1-209ENST00000551165 IGHV1-24A0A0C4DH33 117 aa14.42□□□□□ -0.1
SSH1-209ENST00000551165 BEAN1Q3B7T3 259 aa14.42□□□□□ -0.1
SSH1-209ENST00000551165 STHQ8IWL8 128 aa14.42□□□□□ -0.1
SSH1-209ENST00000551165 C9orf85Q96MD7 179 aa14.42□□□□□ -0.1
SSH1-209ENST00000551165 XCL2Q9UBD3 114 aa14.42□□□□□ -0.1
SSH1-209ENST00000551165 FBN1P35555 2871 aaKnown RBP14.42□□□□□ -0.1
SSH1-209ENST00000551165 SMIM15Q7Z3B0 74 aa14.41□□□□□ -0.1
SSH1-209ENST00000551165 TRPT1Q86TN4 253 aaKnown RBP14.41□□□□□ -0.1
SSH1-209ENST00000551165 PRSS3P2Q8NHM4 247 aa14.41□□□□□ -0.1
SSH1-209ENST00000551165 CBY3A6NI87 242 aa14.41□□□□□ -0.1
SSH1-209ENST00000551165 NXPH4O95158 308 aa14.41□□□□□ -0.1
SSH1-209ENST00000551165 CHCHD1Q96BP2 118 aaKnown RBP14.41□□□□□ -0.1
SSH1-209ENST00000551165 TNFRSF6BO95407 300 aa14.4□□□□□ -0.1
SSH1-209ENST00000551165 LINC00173Q6ZV60 143 aa14.4□□□□□ -0.1
SSH1-209ENST00000551165 KRTDAPP60985 99 aa14.4□□□□□ -0.1
SSH1-209ENST00000551165 SCGB1D1O95968 90 aa14.39□□□□□ -0.11
SSH1-209ENST00000551165 NRACQ8N912 160 aa14.39□□□□□ -0.11
SSH1-209ENST00000551165 KIF25-AS1Q9Y6Z4 181 aa14.39□□□□□ -0.11
SSH1-209ENST00000551165 A0A087WWL8 130 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 PPBPP02775 128 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 MGPP08493 103 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 LINC00315P59091 139 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 FA2HQ7L5A8 372 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 DPH3P1Q9H4G8 78 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 AP5S1Q9NUS5 200 aa14.38□□□□□ -0.11
SSH1-209ENST00000551165 C3orf79P0CE67 100 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 KRTAP24-1Q3LI83 254 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 OR2K2Q8NGT1 345 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 CLUHP3Q96NS8 147 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 Q8N976 141 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 AP1S3Q96PC3 154 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 LINC01587Q99440 93 aa14.37□□□□□ -0.11
SSH1-209ENST00000551165 GIG44P09565 113 aaPredicted RBP14.36□□□□□ -0.11
SSH1-209ENST00000551165 RPL35AP18077 110 aaKnown RBP14.36□□□□□ -0.11
SSH1-209ENST00000551165 CTAG1AP78358 180 aa14.36□□□□□ -0.11
SSH1-209ENST00000551165 C1orf158Q8N1D5 194 aa14.36□□□□□ -0.11
SSH1-209ENST00000551165 A0A096LNJ9 63 aa14.36□□□□□ -0.11
SSH1-209ENST00000551165 INSP01308 110 aa14.36□□□□□ -0.11
SSH1-209ENST00000551165 IGHV3OR16-12A0A075B7B8 117 aa14.35□□□□□ -0.11
SSH1-209ENST00000551165 RPL39LQ96EH5 51 aaKnown RBP14.35□□□□□ -0.11
SSH1-209ENST00000551165 TRGV11A0A075B6L2 103 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 AZU1P20160 251 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 DEFB125Q8N687 156 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 RASL10AQ92737 203 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 MAP1LC3AQ9H492 121 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 GSN-AS1Q9NRJ2 163 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 ZNF876PQ49A33 203 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 SPATA12Q7Z6I5 190 aa14.34□□□□□ -0.11
SSH1-209ENST00000551165 FAM74A4Q5TZK3 123 aa14.33□□□□□ -0.12
SSH1-209ENST00000551165 MRAP2Q96G30 205 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms