RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 BAGE2Q86Y30 109 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 UPK3BQ9BT76 320 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 MLST8Q9BVC4 326 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 IL36BQ9NZH7 164 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 IGLV2-18A0A075B6J9 118 aa10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 PDE6DO43924 150 aa10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 MEF2BQ02080 365 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 ZNF506Q5JVG8 444 aa10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 Q6ZR54 194 aa10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 NHLRC2Q8NBF2 726 aa10.68□□□□□ -0.7
PRPF40B-211ENST00000551063 M0R036 132 aa10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 RS1O15537 224 aa10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 NKX2-5P52952 324 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 MRPL23Q16540 153 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 ESRGQ1W209 222 aa10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 ALKAL2Q6UX46 152 aa10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 PCNPQ8WW12 178 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 MRPS16Q9Y3D3 137 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-211ENST00000551063 PGPEP1LA6NFU8 196 aa10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 H3BVH4 76 aa10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 M0R2N4 97 aa10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 GATA1P15976 413 aaPredicted RBP10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 BLOC1S1P78537 153 aa10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 CFAP126Q5VTH2 177 aa10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 VAX2Q9UIW0 290 aa10.66□□□□□ -0.7
PRPF40B-211ENST00000551063 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
PRPF40B-211ENST00000551063 A8MWV9 139 aa10.65□□□□□ -0.7
PRPF40B-211ENST00000551063 CXCL1P09341 107 aa10.65□□□□□ -0.7
PRPF40B-211ENST00000551063 LINC00336Q6ZUF6 198 aa10.65□□□□□ -0.7
PRPF40B-211ENST00000551063 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
PRPF40B-211ENST00000551063 DERL1Q9BUN8 251 aa10.65□□□□□ -0.7
PRPF40B-211ENST00000551063 HECTD4Q9Y4D8 3996 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 GRIFINA4D1Z8 144 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 K7EQD1 137 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 GYPEP15421 78 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 SRIP30626 198 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 SYT8Q8NBV8 401 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
PRPF40B-211ENST00000551063 TMSB15BA0A087X1C1 80 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 TRBV6-4A0A1B0GX49 114 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 RHOHQ15669 191 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 TTC32Q5I0X7 151 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 ZFP2Q6ZN57 461 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 LYPD6BQ8NI32 183 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 PARLQ9H300 379 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 Q9H8V8 135 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
PRPF40B-211ENST00000551063 MGST1P10620 155 aaKnown RBP10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 GNG4P50150 75 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 SOHLH1Q5JUK2 328 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 PRR27Q6MZM9 219 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 ZNF575Q86XF7 245 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 ZFP82Q8N141 532 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
PRPF40B-211ENST00000551063 IGLV2-8P01709 118 aa10.61□□□□□ -0.71
PRPF40B-211ENST00000551063 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
PRPF40B-211ENST00000551063 SLC25A29Q8N8R3 303 aa10.61□□□□□ -0.71
PRPF40B-211ENST00000551063 PRADC1Q9BSG0 188 aa10.61□□□□□ -0.71
PRPF40B-211ENST00000551063 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 RHODO00212 210 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 RTL8CO15255 209 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 C1orf134Q5TEV5 83 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
PRPF40B-211ENST00000551063 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 SNAI2O43623 268 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 NXPH4O95158 308 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 TIRAPP58753 221 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 UFSP1Q6NVU6 142 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-211ENST00000551063 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 RBFOX3A6NFN3 312 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 M0R381 172 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 DAZAP1Q96EP5 407 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 SSBP4Q9BWG4 385 aaPredicted RBP10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 KRTAP17-1Q9BYP8 105 aa10.58□□□□□ -0.72
PRPF40B-211ENST00000551063 SIVA1O15304 175 aa10.57□□□□□ -0.72
PRPF40B-211ENST00000551063 NDUFS6O75380 124 aaKnown RBP10.57□□□□□ -0.72
PRPF40B-211ENST00000551063 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
PRPF40B-211ENST00000551063 C6orf223Q8N319 242 aa10.57□□□□□ -0.72
PRPF40B-211ENST00000551063 SAMD10Q9BYL1 202 aa10.57□□□□□ -0.72
PRPF40B-211ENST00000551063 JPT2Q9H910 190 aa10.57□□□□□ -0.72
PRPF40B-211ENST00000551063 HERC2O95714 4834 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms